Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00332 ATGGGTTCGAGTGTTAAGAGCAGCAACCAAGGAAGCACTCAACTTGAACCACTTCAACAACAACATCATCATCGTCATCAAATACAGCAAGAGCACCAAATCTCTTTCGGGATGATGCAATCTCCTTCATCATCATCCTCTATCATCCCGGGAAACTTGTTAAACAAGGATTCAGGTGATGGTGGAGCTTATGATTTGGGTGAACTGGACCAAGCCCTTTTTCTCTACCTCGATGGACAAGCCGATCCCTCAAATACTCTTCATCAAGACCAAAGACAGAAGTCATCATCATCCGGAATGAGGCCTCATACTCTCAACATTTTCCCCTCTCAGCCTATGCACGTTCACCCATCATCATCCAATTCCAAGGCAAGTATGGAGTTAGTTTCTGCTTCCAAGAACGTACCCGCTTCTGCCACTGCTCCTCCTCCTCAACCACCTAAACCTGTCAAGCAGCGAGAGAGTAACCGCAAGGGTCCGACCTCAAGTTCTGAACAAGAAGGGCCCAAAACACCAGACCCCAAGACACTGAGACGACTTGCTCAGAATAGAGAGGCAGCTCGCAAAAGCAGGCTTAGGAAAAAGGCATATGTTCAGCAGCTAGAATCCAGTAGGATTAGGCTTAATCAGATTGAGCAAGAGCTACAGCGTGCTAGATCTCAAGGCATATTCTTCGGTGGAAGTGGAGTTATGGGTGGAGAACAAGGTCTTGGTGTGGGTATTAATGGCATAAGCACAGAGGCTGCAATGTTTGACGTAGAATATGCTAGATGGCTAGAGGAGCACCACCGCCTAGTGTGCGAGCTGAGGGCGGCGGTGCAAGAACACCTACCTGAGAACGACCTCAGACTCTTTGTGGACAATTGCTTGGCGCATTACGACCAAGTTATGAACCTCAAGGGTTTAGTGGCCAGATCCGACGTCTTCCACCTTGTTTCCGGCATGTGGAAGACTCCGGCTGAGCGTTGCTTTATGTGGATCGGTGGATTCAGGCCCTCAGAACTCATTAAGATTATGGTGAGTCAAATAGAGCCTCTGACGGAGCAACAAATACTTGGGATATGTGGGTTGCAACAATCAACACAAGAAGCAGAAGAGGCTCTTTCCCAAGGCCTTGAGGCTCTCAATCAATCTCTCCTGAACACTATCACATCAGATTCTTTGAGCTCTCCTCCTGTTATGGCTACCTACATGGGACAGATGGCTCTCGCCATGAACAAGCTCGCTACTCTTGAAGATTTCGTCAAACAGGCAGATAATCTACGGCAGCAAACGGTGCACCGTCTGCATGAGATCCTAACGACGCGGCAGGCGGCGAGGTGTTTTCTGGCGATAGCGGAGTACTTCCATCGCCTGAGAGCCCTCAGTTCTCTCTGGTTGTCCCGTCCTCGCCAGGATCAGTAG 1404 0.4915 MGSSVKSSNQGSTQLEPLQQQHHHRHQIQQEHQISFGMMQSPSSSSSIIPGNLLNKDSGDGGAYDLGELDQALFLYLDGQADPSNTLHQDQRQKSSSSGMRPHTLNIFPSQPMHVHPSSSNSKASMELVSASKNVPASATAPPPQPPKPVKQRESNRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQIEQELQRARSQGIFFGGSGVMGGEQGLGVGINGISTEAAMFDVEYARWLEEHHRLVCELRAAVQEHLPENDLRLFVDNCLAHYDQVMNLKGLVARSDVFHLVSGMWKTPAERCFMWIGGFRPSELIKIMVSQIEPLTEQQILGICGLQQSTQEAEEALSQGLEALNQSLLNTITSDSLSSPPVMATYMGQMALAMNKLATLEDFVKQADNLRQQTVHRLHEILTTRQAARCFLAIAEYFHRLRALSSLWLSRPRQDQ 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00332 467 CDD bZIP_HBP1b-like 175 227 - -
Aip06g00332 467 Gene3D - 174 222 - -
Aip06g00332 467 Pfam Seed dormancy control 266 340 IPR025422 GO:0006351|GO:0043565
Aip06g00332 467 SMART brlzneu 171 257 IPR004827 GO:0003700|GO:0006355
Aip06g00332 467 Pfam bZIP transcription factor 175 203 IPR004827 GO:0003700|GO:0006355
Aip06g00332 467 ProSiteProfiles DOG1 domain profile. 248 462 IPR025422 GO:0006351|GO:0043565
Aip06g00332 467 PANTHER TRANSCRIPTION FACTOR TGA9 76 465 - -
Aip06g00332 467 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 76 465 - -
Aip06g00332 467 MobiDBLite consensus disorder prediction 1 18 - -
Aip06g00332 467 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 217 IPR004827 GO:0003700|GO:0006355
Aip06g00332 467 Coils Coil 194 221 - -
Aip06g00332 467 SUPERFAMILY Leucine zipper domain 175 217 IPR046347 GO:0003700|GO:0006355
Aip06g00332 467 MobiDBLite consensus disorder prediction 1 31 - -
Aip06g00332 467 MobiDBLite consensus disorder prediction 84 138 - -
Aip06g00332 467 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 178 193 IPR004827 GO:0003700|GO:0006355
Aip06g00332 467 MobiDBLite consensus disorder prediction 84 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00332 Aip-Chr6 3872375 3878051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00332 51 466 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 62.000 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip06g00332 DOG1 9.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00332 K14431 - gmx:100815176 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00332 06 3872375 3878051 Aip06g00332 06 3872375 3878051 ECH
Aip06g00332 06 3872375 3878051 Aip02g01839 02 80345770 80355368 PCT