Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00330 ATGCAAAATATTAAGCAGCATATAGATTGTGACTTTTATTTTGTTGGTCTAGGAAAGCCCAAAAGCAAACAACCTACTGGGCTTCTGGCTTGCGTAATAATTGCAGCCTCAACAAAAACCCTAGCTCTTCATCATTTCTCCATTCGGTTTTGGAGCTTCAGCAGCAGCAGCAGTCACAGGAAAACTTCACCTCCGAAAATGCCGTTCAAGAGGTTCGTTGAGATTGGAAGGGTTGCTCAGATCAACTACGGCAAAGAGCATGGGAGGCTAGTAGTCATTGTTGATGTCATCGACCAGAATAGGGCTCTTGTTGACGCCCCTGATATGGTCCGATCCCAAGTGAATTTCAAGAGGCTCTCGCTCACTGATCTTAAGGTTGATATTAAGAGGGTCCCCAGGAAGAAGGAACTCATTAAGGCCATGGAGGAAGCTGATGTCAAGAACAAGTGGGAGAAGAGCTCTTGGGGGAGGAAACTCATTGTCCAGAAGAGAAGGGCATCCCTCAATGACTTCGACAGGTTCAAGATTATGTTGGCTAAGATCAAGAGGGCAGCAACTGTTAGGCAAGAGCTTGCTAAGCTTAAGAAGAGTGCATCTTAA 600 0.455 MQNIKQHIDCDFYFVGLGKPKSKQPTGLLACVIIAASTKTLALHHFSIRFWSFSSSSSHRKTSPPKMPFKRFVEIGRVAQINYGKEHGRLVVIVDVIDQNRALVDAPDMVRSQVNFKRLSLTDLKVDIKRVPRKKELIKAMEEADVKNKWEKSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRAATVRQELAKLKKSAS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00330 199 Gene3D - 67 150 IPR014722 -
Aip06g00330 199 Pfam Ribosomal protein L14 111 183 IPR002784 GO:0003735|GO:0005840|GO:0006412
Aip06g00330 199 PANTHER 60S RIBOSOMAL PROTEIN L14 67 198 IPR039660 GO:0003723|GO:0003735
Aip06g00330 199 CDD KOW_RPL14 73 145 IPR041985 -
Aip06g00330 199 SUPERFAMILY Translation proteins SH3-like domain 71 159 IPR008991 -
Aip06g00330 199 Gene3D - 158 193 - -
Aip06g00330 199 PANTHER RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED 67 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00330 Aip-Chr6 3849603 3852030 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00330 67 199 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 80.451 1.07e-75 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00330 K02875 - gmx:100499889 244.973