Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00328 ATGAGTCTCCAAACCAATTTCTTATCTATTTTGGTTCTCTTGGCTGCAGTTTTTGCATCTTTGCATCTCATAAATCCAAATGAACAGTTCCTCAACATTTTCAAAGACTTCACTATAACACCCTTCTCATCATATTCATATGCATGTTTGCAACTACCTTATATATGCATCTTCTTCAGAGGCCATCATCATAATCATCATCATAACAAGAAACACCCTGATGATGATGATAGTGGAAATGCTGGTTCCATTTGTGATGATTTTCCACCAGGGATTCCACCTCCAAGCACCAACACCACTTCTTATCTCTGTGTTGATCAAAAAGGTTGCTGCAATTTCACAACAGTACAAGCAGCCGTTAATGCAGTTCCAGATTTAAGCCAAAAAAGAACCATAATTTGGATTAACAAGGGCATATACTATGAGAAAGTAATGGTCCCAAGAACCAAAGCCAACATAACATTTCAAGGACAAGGTTACACTTCAACCGCAATTGCATGGAATGACACGGCAAAGTCAGCAAATGGCACATTCTATAGTGGTTCCGTACAAGTTTTTGCATCCAACTTCATTGCCAAGAACATAAGCTTCATGAACTTGGCACCAATGCCAAGTCCTGGAGTTGAAGGAGCACAAGCAGTAGCAATCAGAATATCAGGAGATCAAGCTGAATTCAAGGGATGTGGATTCTTTGGAGCACAAGACACCCTTCATGATGATAAGGGTCGCCATTACTTTAAGGATTGCTATATCCAAGGCTCAATTGATTTCATATTTGGCGATGGAAGGTCCCTTTACGAGAATTGTGAAATAGTTTCTATAGCGAATCCAGTGCCACAAGGATACAGGAGCATAAATGGTGCAGTGACAGCTCATGGAAGAGTGTCCATGGATGATAACACAGGATTTGTGTTTGTGAACAGCACAATAGGAGGGAGTGGGAGAATATGGTTAGGAAGGGCATGGAGACCATACTCACGTGTTGTTTTTGTGTCAACAACAATGTCAGATATCATTGCCCCTGAAGGTTGGAACGATTTCAATGACCCTTCAAGGGATCAGACCATATTCTATGGAGAGTACAATTGCTCTGGTCCCGGAGCTAGCATGGCAATGAGGGCACCATATGTGCAGAGATTAAACGATACACAAGCTCTTCCATTCTTCAACATAACTTTTATTGATGGTGACCAATGGTTGGAAACTTACACACAATTAATAACCTAA 1227 0.4075 MSLQTNFLSILVLLAAVFASLHLINPNEQFLNIFKDFTITPFSSYSYACLQLPYICIFFRGHHHNHHHNKKHPDDDDSGNAGSICDDFPPGIPPPSTNTTSYLCVDQKGCCNFTTVQAAVNAVPDLSQKRTIIWINKGIYYEKVMVPRTKANITFQGQGYTSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNLAPMPSPGVEGAQAVAIRISGDQAEFKGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGDGRSLYENCEIVSIANPVPQGYRSINGAVTAHGRVSMDDNTGFVFVNSTIGGSGRIWLGRAWRPYSRVVFVSTTMSDIIAPEGWNDFNDPSRDQTIFYGEYNCSGPGASMAMRAPYVQRLNDTQALPFFNITFIDGDQWLETYTQLIT 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00328 408 PANTHER PECTINESTERASE 8-RELATED 11 403 - -
Aip06g00328 408 SUPERFAMILY Pectin lyase-like 101 401 IPR011050 -
Aip06g00328 408 ProSitePatterns Pectinesterase signature 2. 251 260 IPR033131 -
Aip06g00328 408 Gene3D - 96 406 IPR012334 -
Aip06g00328 408 Pfam Pectinesterase 104 397 IPR000070 GO:0030599|GO:0042545
Aip06g00328 408 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00328 Aip-Chr6 3839490 3841150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00328 77 401 Carbohydrate Esterase AT1G05310 72.000 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00328 - - ahf:112696095 818.92