Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00326 ATGCCTCCTGTCTTTCCTCCTCCAGGGAAACTACGCTGGAGGAGCGGTCTTACAATAAAAGCAGAAGTGAAGTTTGTTAATGCTGAACAAGCAAAGGAGCTTGTAACAGTTGATGGATATACTGTTCTAGATGTACGCGACAAAACTCAGTTTGAGAGAGCTCACATAAAATCCTGCTATCATGTGCCTCTCTTTGTTGAAAATCAAGACAATGATCCTGGTACCATTGTAAAAAGGACTCTGCACAATAATTTCTCTGGGTTGTTCTTTGGTTTACCATTCACCAAGCCGAATCCTAATTTTGTACAAACGGTCAAGAGTCAGTTTTCGCCCGAAACTAAACTTCTGGTTGTATGTCAGGAAGGACTGAGGTCTGCCGCAGCTGCAAATAAACTAGAGCAGGCCGGTTTCTCAAATGTAGCATGCATAACATCTGGCCTTCAAACTGTAAAACCAGGTACATTTGATTCTGTGGGATCCAAGGACTTGCAAGATGCCGGCAAAGCTGGTTTGGTGACAATCCAAGGGAAAATCTCAACTGTATTGGGAACAATTCTTGTTTGTGCATATTTGTTCATTACCTTCTTTCCTGACCAAGCTGAGAAGATATTCCAACTGGTCCCTGCAGGCTAA 633 0.4281 MPPVFPPPGKLRWRSGLTIKAEVKFVNAEQAKELVTVDGYTVLDVRDKTQFERAHIKSCYHVPLFVENQDNDPGTIVKRTLHNNFSGLFFGLPFTKPNPNFVQTVKSQFSPETKLLVVCQEGLRSAAAANKLEQAGFSNVACITSGLQTVKPGTFDSVGSKDLQDAGKAGLVTIQGKISTVLGTILVCAYLFITFFPDQAEKIFQLVPAG 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00326 210 SMART rhod_4 26 156 IPR001763 -
Aip06g00326 210 Coils Coil 209 210 - -
Aip06g00326 210 CDD RHOD 30 151 - -
Aip06g00326 210 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 20 148 IPR036873 -
Aip06g00326 210 ProSiteProfiles Rhodanese domain profile. 36 159 IPR001763 -
Aip06g00326 210 Pfam Rhodanese-like domain 28 148 IPR001763 -
Aip06g00326 210 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 13 209 IPR044615 -
Aip06g00326 210 Gene3D - 24 154 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00326 Aip-Chr6 3782719 3785451 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00326 9 204 Sulfurtransferasese or Rhodanese AT2G42220 72.449 1.17e-110 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00326 - - ccaj:109797004 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00326 06 3782719 3785451 Aip06g00326 06 3782719 3785451 ECH