Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00325 ATGATTTGCGACTACCTCTACGTGCAACTCAACCTCGTTGTCTTCTCGTCGATTTTGATTTCTCAGGGTTTGGCATCTACTCCTTCACCCGAAGTATCAGCTCTGCAGGATCTATACAAGGCTTTAAACTACCCTCCTCAGCTCCAAGGTTGGAATGGTAGTGATCCATGCGAGGAGTCTTGGAAAGGAATCGCTTGTTCCGGGTCATCAGTTATACACATAAAAATTCGCGGACTGAACCTCACTGGAAATTTTGGAAGCATGCTCCGTGATCTTCAGAACTTGAAGGAACTTGATGTCAGTTCTAATAACATAGGTGGAGAAATACCATTTAGCTTACCCCGCAATGCAAGAAATATGAATTTAAGCCACAATCTCTTAAATGGACCCATTGGCGATGTATTTACTGGCCTGGATGATCTCAAAGAAATGGACCTTTCATACAACAATTTCTCAGGAGATCTTCCAAGATCGTTTGGTTCCTTGAAAAACCTTGATAAATTGTTTCTGCAGAATAACAGATTTACTGGATCAGTCACCTACCTGGCTGAACTTCCACTTTCATATCTGAACATCCAAGACAATCTGTTTAGTGGCATTCTTCCACTCCACTTTCACACCATACCGAATTTACGGATTGGAGGGAATAACTTCCATTCAGAGGGCAGCTCTCCCCCTTGGCCTTTTCCTCTGGACACTGTACCAATAGCAGTTGAACGTAACTTTAGTCACCCACCCTCACACCCAGTTGTACATAACTTTAGTCACCCACCCATACACCCAGTTGAGCATAATACAACTGTGGCAAGTGCCATAAGGAACTATGCTCCTCCACCTCCCAAGGTTAGTCAGCACAAGGAAAAACATATGGGTCCCGGAGGAATAGCTTTTATGGTTGGTGCAGGAACACTAATGGCAACTGGTGTGGCACTCTTCGTTGCAATCCGTTTAAGTAAAAGGCGAGCACATATGCCAAGCTCAAAGAGCTTGGAAAGCAACCATTTCTCTTTACATTCTCATCCAAGCAGTGCAACAATAGAGGTCTCATCTACTGCTTTAGATGAGAGCCCACAAATCCCGGCTTTTGATCCTGCATCCCTCAGGGGTCCAATGGGATTGCCTCCTGTGCACCACAACAATATAGCCGACGCTTCAAGAAGAAGTTTTTCTAGAAGAAGCAGATCCACCGGAAGGACGAAAGTTTACACCGTATCAGAGCTTCAGTTTGCTACTAACAACTTCAATGAATGCAACGTTCTGGGAGAGGGCTCTCTTGGCACTGTATACAGAGCCAAATTTCCTGATGGCAAAATTCTGGCAGTGAAGAGCATAAACTTGGCGGGTGTGTCTTACAGAGAAGAGGAAAAGTTCTTGGATGTTATCTGCACGGCTTCCCGATTGAAGCACCCCAACATAGTAGCACTGAATGGCTACTGTTTGGAGCGGGGAAAGCATCTTCTTGTGTATGATTATGTTAGGAATTTGACTCTGCACGATGCTCTTCACAGAGACGTATACAAGCCTCTATCATGGATCCTCCGTCTCCGGATAGCTGTCGGCGTTGCTAACGCCCTCGACTACTTGCACTCAGCATTCTCCCCACCTGTTGCCCATGGAAACTTGAAGGCCGCCAATGTTCTTCTGGACGAGAATTTGATGCCTCGTCTTTCTGACTGTGGCTTGGCTGCTTTGAGACCACTGAGGAGCATTCAGGCTACCGAGGCTCCTATTGATGTAGGTTACCTGTCCCCTGACCATGGCAGAGCAGGAGGTAGCAGCAGAAAGAAAGATGTGTATGCCTTTGGGGTACTGCTTCTGGAAATGTTAACGGGAAGAAAAGCATTCGATGGTGGCAGGCCAATTGAGGAGCAGTACCTAGTGAAGTGGGCTTCACCCAGGCTTCACGATAACGCCAGTTTGGAGCAGATGGTGGATCCCGATAAGGAGAACCTCTGTCTGTATGGATACCCCACTGAACAGTGGGAAGTTAATTTACCCGCTGAAGAAGTTCCTCCTGAACTTCCCGAGCCTGCATTGGGCATAAACTTTGCTAGGGATGGGATGCAAGAGAAGGACTGGCTAACTTTAGTTGCAGTTCACAGTGATGCATGGCTAATTGCAGTGGCTTTCTACTTTGGAGCAAGATTTGGTTTTGACAGAGCTGACAGCCTTCGAGGCATTTTCGTCCTCAGATGTCAGAAGTTGTGGACTCGCTTGTATCATTCTCGCAAAAGGAAGAAAGCGAAGAGAAGAACGGTGCTTCAGTGTGTGTGTGGCGGTAGCTCCTCACTCTTCAATCTTGTTTCTCTTTTCAATTTCTCTCAGTTGAAAGTCATGGATATAGACCCTGCAGAACTTAGGTATTTGGAGGATGAGGATTCATCATTGATGAAAACTATTAAGGGTGCAACAACTGGTTTAATTTCTGGCACCATCTGGGGTACTGTTGTTGCCACCTGGAATGATGTTCCTCGTGTTGAGAGAAACGTTGCTCTTCCAGGCCTGATAAGAACTTTCAAGATGATGGGCAACTATGGATTGACCTTTGCTGCCATAGGAGGAGTTTACATCGGTGTTGAGCAGTTGGTGCAGAACGCTAGGATGAAGAGGGATCTTGTCAATGGTGCTGTAGGTGGATTTGTTGCTGGTGCAACTGTTCTGGGTTATAAAGGGAGGAGCATCAAAACTGCAATTCAGGCTGGGTCAGCATTGGCATTCACCTCTGCATTTATTGATTTCGGAGGTCAGAGAATAAAACATGATTCTCATAAGGAGTATGCTGCTTACACTACAAAGAAAAGACCCAATGCTGAATCTGCTGATGCATAA 2829 0.4588 MICDYLYVQLNLVVFSSILISQGLASTPSPEVSALQDLYKALNYPPQLQGWNGSDPCEESWKGIACSGSSVIHIKIRGLNLTGNFGSMLRDLQNLKELDVSSNNIGGEIPFSLPRNARNMNLSHNLLNGPIGDVFTGLDDLKEMDLSYNNFSGDLPRSFGSLKNLDKLFLQNNRFTGSVTYLAELPLSYLNIQDNLFSGILPLHFHTIPNLRIGGNNFHSEGSSPPWPFPLDTVPIAVERNFSHPPSHPVVHNFSHPPIHPVEHNTTVASAIRNYAPPPPKVSQHKEKHMGPGGIAFMVGAGTLMATGVALFVAIRLSKRRAHMPSSKSLESNHFSLHSHPSSATIEVSSTALDESPQIPAFDPASLRGPMGLPPVHHNNIADASRRSFSRRSRSTGRTKVYTVSELQFATNNFNECNVLGEGSLGTVYRAKFPDGKILAVKSINLAGVSYREEEKFLDVICTASRLKHPNIVALNGYCLERGKHLLVYDYVRNLTLHDALHRDVYKPLSWILRLRIAVGVANALDYLHSAFSPPVAHGNLKAANVLLDENLMPRLSDCGLAALRPLRSIQATEAPIDVGYLSPDHGRAGGSSRKKDVYAFGVLLLEMLTGRKAFDGGRPIEEQYLVKWASPRLHDNASLEQMVDPDKENLCLYGYPTEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLTLVAVHSDAWLIAVAFYFGARFGFDRADSLRGIFVLRCQKLWTRLYHSRKRKKAKRRTVLQCVCGGSSSLFNLVSLFNFSQLKVMDIDPAELRYLEDEDSSLMKTIKGATTGLISGTIWGTVVATWNDVPRVERNVALPGLIRTFKMMGNYGLTFAAIGGVYIGVEQLVQNARMKRDLVNGAVGGFVAGATVLGYKGRSIKTAIQAGSALAFTSAFIDFGGQRIKHDSHKEYAAYTTKKRPNAESADA 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00325 942 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 2 649 - -
Aip06g00325 942 Gene3D Transferase(Phosphotransferase) domain 1 493 668 - -
Aip06g00325 942 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Aip06g00325 942 ProSiteProfiles Protein kinase domain profile. 414 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00325 942 Pfam Tim17/Tim22/Tim23/Pmp24 family 798 906 - -
Aip06g00325 942 SUPERFAMILY L domain-like 51 212 - -
Aip06g00325 942 Pfam Alfin 636 721 IPR021998 GO:0006355|GO:0042393
Aip06g00325 942 SUPERFAMILY Protein kinase-like (PK-like) 389 636 IPR011009 -
Aip06g00325 942 Pfam Protein kinase domain 415 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00325 942 PANTHER OS01G0253100 PROTEIN 2 649 IPR045271 GO:0004714|GO:0006468
Aip06g00325 942 Gene3D Phosphorylase Kinase; domain 1 378 491 - -
Aip06g00325 942 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Aip06g00325 942 Gene3D Ribonuclease Inhibitor 28 235 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00325 Aip-Chr6 3765474 3773351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00325 10 645 Strubbelig Receptor Gene Family AT5G06820 49.403 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Aip06g00325 Pkinase 7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00325 - - gmx:100775254 854.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00325 06 3765474 3773351 Aip06g00325 06 3765474 3773351 ECH