Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00321 ATGTACCAATATCTGTACGGAAGTAGTAGTGGTGAGTGCTGGGAACAAGGTCAGAGTAGTTATGAGCCCTATTATGATGAGGTTCCTGCTTCTGCTTGGAACTTTGAGCTTCCATTAACAACAGGAACAGTTGTTGATGCAGTTGAGTCTTCTAGTATTAGCAGTAGTAGTGCAGATAGCTATTCCTCTTATGAAAGATGCAACACTATTCCTTCTTCATACTCTGATGTTGCTGCTAATGATGTGCTAATCTTCCATCAACACTATCCACAACAACATCATGTTCATAGTAATAAACTACTCATTGGTGATGATCATGATCAATATGATGCTACAGATCATCATGAGAAGCCTCTTCAGATTTGCTTTCAAACAAATCAGACAGAAAAGCAAGGCTATGTGAGTGGTTCTAGCAACTGTGGTTATAGGAGAGGTCCATCATCATCATCGTCATCATCGATTAAAAGAAGAATAAGATGGACCAAAGATCTGCATGAGCCATTCATGACCGTTGTTAATAGACTCGGTGGTCCGCATAAGGCAAAGCCTAAGGCTATATTAGATATGATGAAATCTGATTTGTTGTCAATTACACACATTAAAAGTCACTTGCAGAAATATAGGTCTACAATATGGCACCACAAAGCTTCACATGAAAGATCATTTGAGGAAGGAGATAAAACAGATGTCACTCATCAGCTTCAACACAAAATACAAATACAAATTGAGGAATCACAACAACTTCAACAAGAGGTCCGCAGGAGTATTCATCAACAACTGGAGATGCAACGAACTTTGCAAATGCTGATTGAACAGCAAAGGGAGCAGCTCAAGATGATGTTAGATCAACAAAAAGAAAGAAACAAAAGTGGGAAAGAAATTAAATAA 888 0.3829 MYQYLYGSSSGECWEQGQSSYEPYYDEVPASAWNFELPLTTGTVVDAVESSSISSSSADSYSSYERCNTIPSSYSDVAANDVLIFHQHYPQQHHVHSNKLLIGDDHDQYDATDHHEKPLQICFQTNQTEKQGYVSGSSNCGYRRGPSSSSSSSIKRRIRWTKDLHEPFMTVVNRLGGPHKAKPKAILDMMKSDLLSITHIKSHLQKYRSTIWHHKASHERSFEEGDKTDVTHQLQHKIQIQIEESQQLQQEVRRSIHQQLEMQRTLQMLIEQQREQLKMMLDQQKERNKSGKEIK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00321 295 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 48 293 IPR044848 GO:0003700
Aip06g00321 295 SUPERFAMILY Homeodomain-like 154 210 IPR009057 -
Aip06g00321 295 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 155 209 IPR006447 GO:0003677
Aip06g00321 295 Gene3D - 154 211 - -
Aip06g00321 295 MobiDBLite consensus disorder prediction 134 155 - -
Aip06g00321 295 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 48 293 - -
Aip06g00321 295 Coils Coil 267 287 - -
Aip06g00321 295 Coils Coil 231 251 - -
Aip06g00321 295 Pfam Myb-like DNA-binding domain 159 208 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00321 Aip-Chr6 3720823 3723572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00321 147 284 G2-like Transcription Factor Family AT4G28610 44.286 2.87e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip06g00321 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00321 - - aip:107647908 573.933