Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00318 ATGAATGAGAACAAGATTGATTATTGCAGAGGAATGATTCAACAAAGCCAAGGAGGACTATTTGATACCATACAGTGTTGGAACATGGTTGGAGGAGGATCACGGCCGCCACTGCCGCCACAAATAGGCCCTGCTGCCACCATCATGAGCCGGTTCGAGTCGCCGGCTTCTGCCTTCTATGCAGCAGAACTCTGCATGGGGTTTGCAGAATATGAACACTCTCAGGCTCAGTTCTCTAAGATGAATAATAATAATAATAATAATGATTTGGAATTCCCTTTGTATCAAAGGGACAAATTTGATCTCTCAAACACTTTGCAAGCAATGGTGAATTCTCAATTCAATACCAAAAATCAATGCTTTAGATCATCCAACAAAATCCCATGTGACAATTTTCCTGCCAGAAAGTTCCATCACCAACAGAAGTTCTTCACTGATGCCATGACTTCACCATTTCCTAACAAAGGAAATCAAGATAATATAGTGAGCTTTGATTCTTATCAAGATAGGTCTCCAACACCTTCTTCAGGAGGAAGTGTATCAGCAAACTCTGCTTCTAATGGGGTAACCATATCGAGTAAGACGCGTATAAGATGGACTCAGGATCTTCATGAAAAGTTTGTTGAATGTGTGAATCGCCTTGGTGGTGCTGATAAGGCAACACCAAAGGCTGTATTGAAGATGATGGACTCAGATGGATTAACAATCTTTCATGTCAAAAGCCATTTGCAGAAATATAGAATTGCTAAGTACATGCCTGACCCAATTCATAATGCTGAGATATATAAATGGTTATATTTTTTAAATGCTTCTGAAATTTGCAGTGGAATTCAAATTAGAGAAGCACTTCAACAACAATTAGATGCACAAAAGCTTCTTCATGAACAACTAGAGAATCAGAGAAAGTTGCAGCTGCGAATCGAGGAACAAGGTAGGCAGTTGAAGAAAATGTTTGAAGAGCAGCAAAAAGCAACGAATGAACTTTTGAATTGTCAGAATATAATAACCAAAGATGATACATAA 1023 0.3891 MNENKIDYCRGMIQQSQGGLFDTIQCWNMVGGGSRPPLPPQIGPAATIMSRFESPASAFYAAELCMGFAEYEHSQAQFSKMNNNNNNNDLEFPLYQRDKFDLSNTLQAMVNSQFNTKNQCFRSSNKIPCDNFPARKFHHQQKFFTDAMTSPFPNKGNQDNIVSFDSYQDRSPTPSSGGSVSANSASNGVTISSKTRIRWTQDLHEKFVECVNRLGGADKATPKAVLKMMDSDGLTIFHVKSHLQKYRIAKYMPDPIHNAEIYKWLYFLNASEICSGIQIREALQQQLDAQKLLHEQLENQRKLQLRIEEQGRQLKKMFEEQQKATNELLNCQNIITKDDT 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00318 340 Coils Coil 280 300 - -
Aip06g00318 340 Pfam MYB-CC type transfactor, LHEQLE motif 277 324 IPR025756 -
Aip06g00318 340 SUPERFAMILY Homeodomain-like 192 248 IPR009057 -
Aip06g00318 340 Pfam Myb-like DNA-binding domain 198 247 IPR001005 -
Aip06g00318 340 Gene3D - 193 252 - -
Aip06g00318 340 Coils Coil 307 327 - -
Aip06g00318 340 MobiDBLite consensus disorder prediction 159 187 - -
Aip06g00318 340 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 194 249 IPR006447 GO:0003677
Aip06g00318 340 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 45 338 IPR044848 GO:0003700
Aip06g00318 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 191 251 IPR017930 -
Aip06g00318 340 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 45 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00318 Aip-Chr6 3709736 3711375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00318 179 321 G2-like Transcription Factor Family AT4G28610 52.740 2.15e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip06g00318 Myb_DNA-binding 6.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00318 - - gmx:100527257 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00318 06 3709736 3711375 Aip06g00318 06 3709736 3711375 ECH