Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00315 ATGAAGTTACTCTCTCTATTGCATCACTCATCACACAACCAACAACTGTTACTCGCTCATCATGGCCAAGCACCAATTGAATCGCGCCGATTGCCGCAGCACCACAATCAACCCCAAGCTTCGTTGTTAGCTCCCTCTCCAGCTCACGATGACACCGATCATCGAACCCGTCGAGGTCTTCGTTCTCGCTACCTTGCCTTCAACAACATGATTAACGATGAAAGGGACGAAATCGCAAGGGCTGATTCCAAGATGTTTGAGTTGATATTTGGCGAAATGGAGAGGTTGCATCAACTAGTTACAAAACCAAGAGAACAAGTAGTTGATGCAAAGGCTCTGTTGGACATAACGAAATCCTTGGTAATGAATGGTCCCATCTATGCTAAAGTAATGCAGAGGAAGGCTGTTAATCGTAGAAGTAGGAAGCATGTGAGGCCCAATGAATTGGCTCGGCTAGAAGAGCTTGGCGGAGGTCTAAGAGAAGTAAAAGCTGATACAGATAAAAATATGTTAACGATGTTTAACATCTTAAGGAAAAATAGTGTTATTAAGCTTGAGAATCTGATTTTGAATAGGAACTCCTTTGCTCAAACAGTGGAGAATTTATTCGCTTTATCATTCTTAGTCAAAGATGGGCGGGCTGAAATAAAAGTCAACGAGGCTGGATCACAACTAGTAGTGTCACCTAGAAATGCCCCTCGTGCAAATGCAGTTCGTGTTGGGGATGTTGCTTTCAGTCACTTTGTGTTCAGATTGGATTTTAAGGATTGGAAGCTATTGATCGATTTTGTTGGGGTTGTGGAGGATCTAATGCCTCGTAGGGAATAG 828 0.4312 MKLLSLLHHSSHNQQLLLAHHGQAPIESRRLPQHHNQPQASLLAPSPAHDDTDHRTRRGLRSRYLAFNNMINDERDEIARADSKMFELIFGEMERLHQLVTKPREQVVDAKALLDITKSLVMNGPIYAKVMQRKAVNRRSRKHVRPNELARLEELGGGLREVKADTDKNMLTMFNILRKNSVIKLENLILNRNSFAQTVENLFALSFLVKDGRAEIKVNEAGSQLVVSPRNAPRANAVRVGDVAFSHFVFRLDFKDWKLLIDFVGVVEDLMPRRE 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00315 275 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 50 122 - -
Aip06g00315 275 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 122 275 - -
Aip06g00315 275 PANTHER UNCHARACTERIZED 50 122 IPR027786 GO:0005634|GO:0006281|GO:0030915
Aip06g00315 275 Pfam Nse4 C-terminal 183 270 IPR014854 -
Aip06g00315 275 PANTHER UNCHARACTERIZED 122 275 IPR027786 GO:0005634|GO:0006281|GO:0030915
Aip06g00315 275 MobiDBLite consensus disorder prediction 32 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00315 Aip-Chr6 3665249 3669032 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00315 119 275 Non-SMC Element family AT3G20760 54.140 7.23e-50 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00315 K22825 - dcr:108225363 219.935