Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00301 ATGTTTTGTTCCATAATTTTCTCAGTGCTAATAACAACACTTGTTCATGAATCAAATGCTCAATTGAGTTCAAGCTTCTACAGCAGCACATGCCCCAACGTGTCTTCCATTGTGAGGAGTGTGGTTCAGCAAGCTTTGCAATCTGATTCTCGCATTGGCGCAAGCCTAACTCGCCTTCATTTCCATGATTGCTTTGTTAATGGGTGTGATGCATCAGTTTTGTTGGACCAAGGTGGCAACATAACACTGAGCGAGAAGGGTGCAGTTCCAAACAATAATTCAGCTCGTGGGTTTGATGTAGTTGATAAAATCAAGAGTGCTGTTGAAAATTCATGCCCTGGTGTTGTGTCTTGTGCTGACATTCTTGCTCTTGCGGCTGAAGCTTCTGTCTCTCTGGGAGGAGGTCCTTCATGGAACGTTGTTCTTGGGAGAAGGGATGGTGTAATTGCAAACCAATCAGGAGCGAATAATTCGATTCCAACTCCATTTGAAAGCTTAGCGAACATCACAGCAAAATTTGCTGCTGTTGGACTCAATATAACTGATCTCGTTGCATTATCCGGTGCACACACATTCGGGCGAGCACAATGTAGATTTTTCAACCAGAGACTCTTCAACTGGAGCGGCACAGGGAGCCCTGATCCCACTCTGAGCCCGTCGTATGTGGCGAGCCTTCAGCAGAGCTGTCCGCAGAATGGAAGCAGTGGGACCACACTCAACAACCTGGACCCTTCATCTCCGGACACCTTCGACAACAACTACTTCTCGAACCTCATCAACAACCGTGGCCTCCTCCAGACGGATCAGGAGCTCTTCTCCTCCAACAACAGCGTCACCATCTCCCTTGTGAACAGCTTCGCCGGCAACCAGACCGCCTTCTTCGAAGCCTTTGCTGAGTCCATGATCAACATGGCCAACATTAGCCCTTTGACTGCACCCCAGGGTCAAATCAGATCGTACCTACACCGAAGACAATGGTCGAACCCACTCGCACCTAAGTCCAGCTCAGACCGCACTTTGCTACCTTCACGCGCCGCCCTCCCACGCGCCACTCCACCCACCCTCCCAAGCAACCTTAACCAACTTCAGCACCGAGCTTGCACTGTGATGGCGGAAGAGACTTCGGATGCTATGAACCTTGATTTGAATCTGGGTCCAGGCCCTGACCCAACCATATCAACTGATGGTCTGAACTTGGATGATTGGATTGAGGAGCCTCTTCAGAGAATCAGTGAAGCTGTGAGGCTCAGGGGGAGGCAACGGTGGAGGTGGCGGCATATCCCTATACCTCCTCCCGAAGTTCCGCTTCACCTTCCCCCGGAAGCCCCTAGGCAATTTCATATACCCCCTGAAGCAAGGAACATCTCAATGGAATTGAACCAGTTTTTGGTTAATTCTGGTCAAGGGGGTGCATTGCAGGCTGGTGAAGGCAGTGTGGCAGCTGAGGAAAGGACGGAGGTGGCACCAAAAGCTTGTGAGAACAACAATGGTGTTATGGATGATGCGGCTTTGGAGAAGAAGGATGATGATGAGAAAAGTGGTGGCACTGATGGGGACTTCTTTGATTGTAATATCTGTTTAGACCTGGCCAGGGATCCTGTTGTGACTTGCTGTGGTCATTTGTTCTGTTGGCCGTGCCTGTATCGATGGCTGCATCTGCACTCGGATGCCAAGGAGTGTCCGGTTTGTAAAGGAGAGGTGACTTTCAAGAATGTTACACCAATATATGGTCGTGGAAATAGTGTCCGCAATGCTGAGGACGATCCCACCCTGAAAGTCCCTCTGAGGCCCCCAGCCAGGCGTGTCGAGAGTCTGAGACAAACCATTCAGAGAACTGCATTTGCACTCCCTGTGGAAGAGATGATTCGTCGTCTTGGAAGCAGGATTGATCTCACTAGGGATTTACTTCACCCGCATGAACCAGACAATGCCCGTGAAACAGCAGAAAGAACTAGTTCATTGCTAAGTAGGTTTTTGACATCTCGAGGTATAAGGAGAGAGCAAAACATTGGGGCTCCTGCAGATGACGTAGTGGGTTTGACGCATAATAATGTTAATGTTAATGTTAATAGTCATGAGGCTGGGGATAATCGCAGGGCCCAATCCCTTCTACTTAGAAGAACACAGTCACATAGGGCAACACTTTCTACCCTTTCATCAGCACTGAATTCTGCTGAAAGGCTAGTTGAGGCATATTTCCGTAGCCATCCATTAGGTAGAAACCAAGAGCAGCCTCCTCCAGTTGATGATAGAGATTCCTTTTCAAGCATCGGTGCCGTCATCAATTCCGAGAGTCAGGTGGACACTGCTGTAGAAATTGATTCCATGGTATCCTTGTCAACATCCTCTTCTAGGAGGAGAAATGATGCTTCAAGAGTGTCTGATGTGGATAGTGGAGACTCTCGCGCTCCAAGGCGCAGACGTTTGAACTGA 2433 0.4903 MFCSIIFSVLITTLVHESNAQLSSSFYSSTCPNVSSIVRSVVQQALQSDSRIGASLTRLHFHDCFVNGCDASVLLDQGGNITLSEKGAVPNNNSARGFDVVDKIKSAVENSCPGVVSCADILALAAEASVSLGGGPSWNVVLGRRDGVIANQSGANNSIPTPFESLANITAKFAAVGLNITDLVALSGAHTFGRAQCRFFNQRLFNWSGTGSPDPTLSPSYVASLQQSCPQNGSSGTTLNNLDPSSPDTFDNNYFSNLINNRGLLQTDQELFSSNNSVTISLVNSFAGNQTAFFEAFAESMINMANISPLTAPQGQIRSYLHRRQWSNPLAPKSSSDRTLLPSRAALPRATPPTLPSNLNQLQHRACTVMAEETSDAMNLDLNLGPGPDPTISTDGLNLDDWIEEPLQRISEAVRLRGRQRWRWRHIPIPPPEVPLHLPPEAPRQFHIPPEARNISMELNQFLVNSGQGGALQAGEGSVAAEERTEVAPKACENNNGVMDDAALEKKDDDEKSGGTDGDFFDCNICLDLARDPVVTCCGHLFCWPCLYRWLHLHSDAKECPVCKGEVTFKNVTPIYGRGNSVRNAEDDPTLKVPLRPPARRVESLRQTIQRTAFALPVEEMIRRLGSRIDLTRDLLHPHEPDNARETAERTSSLLSRFLTSRGIRREQNIGAPADDVVGLTHNNVNVNVNSHEAGDNRRAQSLLLRRTQSHRATLSTLSSALNSAERLVEAYFRSHPLGRNQEQPPPVDDRDSFSSIGAVINSESQVDTAVEIDSMVSLSTSSSRRRNDASRVSDVDSGDSRAPRRRRLN 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00301 810 MobiDBLite consensus disorder prediction 778 810 - -
Aip06g00301 810 SMART ring_2 523 563 IPR001841 -
Aip06g00301 810 Gene3D - 26 319 - -
Aip06g00301 810 PANTHER PEROXIDASE 72-RELATED 6 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00301 810 CDD RING-HC_AtRMA_like 521 565 - -
Aip06g00301 810 Pfam Peroxidase 38 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00301 810 MobiDBLite consensus disorder prediction 788 810 - -
Aip06g00301 810 ProSiteProfiles Plant heme peroxidase family profile. 21 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00301 810 Pfam Zinc finger, C3HC4 type (RING finger) 523 563 - -
Aip06g00301 810 Gene3D Peroxidase, domain 2 160 304 - -
Aip06g00301 810 MobiDBLite consensus disorder prediction 493 513 - -
Aip06g00301 810 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00301 810 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00301 810 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00301 810 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00301 810 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00301 810 CDD secretory_peroxidase 21 318 IPR033905 GO:0004601|GO:0042744
Aip06g00301 810 ProSitePatterns Zinc finger RING-type signature. 538 547 IPR017907 -
Aip06g00301 810 ProSiteProfiles Zinc finger RING-type profile. 523 564 IPR001841 -
Aip06g00301 810 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 495 596 IPR013083 -
Aip06g00301 810 SUPERFAMILY Heme-dependent peroxidases 21 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip06g00301 810 PANTHER PEROXIDASE 6 321 - -
Aip06g00301 810 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00301 810 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00301 810 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00301 810 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00301 810 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00301 810 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00301 810 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00301 810 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00301 810 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00301 810 SUPERFAMILY RING/U-box 519 577 - -
Aip06g00301 810 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00301 Aip-Chr6 3545197 3550010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00301 9 318 Peroxidase AT5G06720 69.355 4.40e-151 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00301 K10666 - gmx:100811099 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00301 06 3545197 3550010 Aip06g00301 06 3545197 3550010 ECH