Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00272 ATGAGGCGTCTAACGCGCCTCTGTATTGCTATTGCCTTCTATTTTGGAGCCAGATTTGGGTTTGATAAAGCTGATAGGAAACGCCTTTTCAATATGATTAATGAAGTGCCCACAATATTTGAAGTTGTTACTGGTGCAGCCAAGAAACAAGTGAAGGAGAAGTCTTCAGTTTCGAACCATAGTGGCAGCAAATCAAAGTCCAACTTTAAAGCAAGGTCGGAAGTGGAAGAGTCGGAGTACTATTCAGAGGAATTGGTCCGTGCCCCTGATCCAGTTGAAGTTCTCCATGTTGATGGTGAAGGGAGCAATGTAGGCGAGGAAGGGAGTGAGGGATTCGAAGGGGACGAAGGTTTTGAAGAAGAGTCAGAGATACATGATGAATTTGGGGATGGGTTCTATGACAACTGGGAAGAAAGAGCAATTAATGAAATTGCTGATCTAGGTTGTATGAATTTGAAGGAAATCACAGTGGAAGAGATTAAAAGTCTCCATTTTCCAGATCGGGAAGTCGCATTTTTATTCTACAACTTATATGCAAAAATGAATGGGTTTGCCGCTCGAAGGTATAGGTCTCGGCGTAATCTAAATAATGAGTTGATACAACAATCTTTTGTATGCTTCAGGCAGGGCTTTCGGAAGGCAAGAATTTGTGATGGAGTCGAAGTTGCTGATTGGAAACGGGAGCCGAAGCCAGAGACTAGGTGTGGCTGTGAGGCAGAAATGCGCGTCCATATCGACAAGGATACGGGCAGATGGATTGTAACATACTTCCAGGAAGTTCATAATCACAAGATGCTTGAGGACACACTTACTTTCATGCTTCCAGGACATAGAAGGATGAACTCGGCAGCAATTGATCAAATGAATATGATGTTAAAAGTCGGCATCAAGACCCCACAGATTTATGCATCGTTTGTGCAGACAGCAGGTGGGTGTGAAAATGTTCCGTTTTTGAAGAGAGACATGTACAACAGAATTGACAAGCAACGGAGGATTATTGGTGGGGATGCAAGTGCGTGCCTGAAGTTGTTGCAACGTATGGAAGTAGAAAATCCAGGAATGTTTGTTAGACACCTAGCGGACAAAGATGGTCGTTTGGTGCATTTATTTTGGTGTGATAACTGCAGTCAACTAGATTATGAAATATTTGGGGATGTATTAGCATTTGATGCGACATATCGCAAGAATAAGTACATGTGTCCGCTAGTGGTTTTCTCAGGGGTTAATCATCACAATCAAACAATCGTGTTTGCCGCTGCCCTTGTTGCGAATGAGACAGAGGAAACATATAAGTGGCTATTGCAGCAATTTTTGGAAGGCATGAAGGGCAAGGCACCCGAATGTGTCATCACTGATGGTCATGGAGCCATGAAGAAAGCAATTGAATCAGTTTTTCCAAATTCGTATCATCGTCTGTGTGCATGGCACTTACTCCGAAATGCAACCTCAAACATAAGCAATCCTGTGTTTACATCTGAATTCAAGAAATGCATGTTATTTGACTATGAAGTGGCAGAGTTCGAACAGCACTGGAATAATGTGGTTTCTGAGCTAGGCCTACAAGATAATCCCTGGGTGTGTGATCTATATGCTAGAAGACATATGTGGGCAACTGCACACATCCGTGGTAATTTCTTTGGGGGCTTCCGAACCACGTCAAGATGTGAGGGGCTTCACTCTATGCTCGGCAAGTTTGTGCATTCCCGGCACAACTTAAAAGACTTTGTTGAGCAATTCTTTCGATGTATTAGTCAAATGAGGTCCCGGGAAGCATTCTCTGACTTACAATCCACTGTTGGGGATATGGTACTACAAAGCCCTCTACGATCGCTTGAAAGGTCTGCGGCAAGTGTACTGACAAGAGAGATATTTCTTATTTTCCGACCAATGCTTTCACGGGCTTGCACGTTAAAGGTAAGGTCGTGTACATTCACAGCATGTTCAGATATCTACTCCCTATTCCGGTCTGGAGATTCTGCCCGAGAGTGGCGCGTTTCACATTATCGAAATGGGTCATTCTTCAAGTGTTCGTGCATGAGGATGGAGACCCTTGGGATTCCTTGTGACCACATTATAGCAGTATTTCATCACCTTGATATCACTGAAATGCCTGCGAGTGTAATATTGGAGAGGTGGTCAAAAGATGCCCGTTCGAGGGTAAGGGCTTTCATGGAAAAGGGACCGTTTTGCTGGGATTCAATGGTTACCTGCCGCAATTGGATGTTGAATGACCTATGCAGGGAGTTGTGTGTGCTTGCTTCTGCACAAGTGGATGATTTTGTGGACGTCACTGGTAAATTGAGAAATGAAATTTTGCACTTGAAAAGCAAGAGAGTTTCTCCAATTGGGGAAGGAACTGATCCTCTGGTGTCATCTACTCTTGAGGATTGTGTAAGGGATCCACAGGTTCTACGTCACCACAAGCGCCGTAAATTTGGTGTGGGTAGGCAGCCATCTAGCAAGGGTATAAAGAGATGTGGAATTTGCCGCGCGGTTGGCCATAACCGATTATCTTGTTCACAAAGGCATACACACGGGCAAGGACACACTGCTGTTGATAGTGGTACCCAACGGAGGGCTGTTTATGAAGAGGCTGATTATGGTGACTATGAAGATTCATGGGAAGAGTGCCACCTTTGGAGCGGTCACGATGCTAGCGAGAACCATGAAGACGAATCTTGCGAGGAAGACCATTACTTGGATGTATCTTTGTCGGAGCCATGA 2724 0.4438 MRRLTRLCIAIAFYFGARFGFDKADRKRLFNMINEVPTIFEVVTGAAKKQVKEKSSVSNHSGSKSKSNFKARSEVEESEYYSEELVRAPDPVEVLHVDGEGSNVGEEGSEGFEGDEGFEEESEIHDEFGDGFYDNWEERAINEIADLGCMNLKEITVEEIKSLHFPDREVAFLFYNLYAKMNGFAARRYRSRRNLNNELIQQSFVCFRQGFRKARICDGVEVADWKREPKPETRCGCEAEMRVHIDKDTGRWIVTYFQEVHNHKMLEDTLTFMLPGHRRMNSAAIDQMNMMLKVGIKTPQIYASFVQTAGGCENVPFLKRDMYNRIDKQRRIIGGDASACLKLLQRMEVENPGMFVRHLADKDGRLVHLFWCDNCSQLDYEIFGDVLAFDATYRKNKYMCPLVVFSGVNHHNQTIVFAAALVANETEETYKWLLQQFLEGMKGKAPECVITDGHGAMKKAIESVFPNSYHRLCAWHLLRNATSNISNPVFTSEFKKCMLFDYEVAEFEQHWNNVVSELGLQDNPWVCDLYARRHMWATAHIRGNFFGGFRTTSRCEGLHSMLGKFVHSRHNLKDFVEQFFRCISQMRSREAFSDLQSTVGDMVLQSPLRSLERSAASVLTREIFLIFRPMLSRACTLKVRSCTFTACSDIYSLFRSGDSAREWRVSHYRNGSFFKCSCMRMETLGIPCDHIIAVFHHLDITEMPASVILERWSKDARSRVRAFMEKGPFCWDSMVTCRNWMLNDLCRELCVLASAQVDDFVDVTGKLRNEILHLKSKRVSPIGEGTDPLVSSTLEDCVRDPQVLRHHKRRKFGVGRQPSSKGIKRCGICRAVGHNRLSCSQRHTHGQGHTAVDSGTQRRAVYEEADYGDYEDSWEECHLWSGHDASENHEDESCEEDHYLDVSLSEP 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00272 907 Pfam Alfin 9 44 IPR021998 GO:0006355|GO:0042393
Aip06g00272 907 Pfam FAR1 DNA-binding domain 174 266 IPR004330 -
Aip06g00272 907 MobiDBLite consensus disorder prediction 51 71 - -
Aip06g00272 907 PANTHER OS02G0262500 PROTEIN 161 791 - -
Aip06g00272 907 MobiDBLite consensus disorder prediction 888 907 - -
Aip06g00272 907 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 161 791 IPR031052 GO:0006355
Aip06g00272 907 Pfam MULE transposase domain 386 480 IPR018289 -
Aip06g00272 907 SMART 26again6 674 701 IPR006564 GO:0008270
Aip06g00272 907 ProSiteProfiles Zinc finger SWIM-type profile. 663 699 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00272 Aip-Chr6 3165318 3169903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00272 8 73 Alfin-like Transcription Factor Family AT5G20510 63.636 1.83e-22 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g00272 MULE 1.3e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00272 - - ahf:112758016 1682.54