Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00261 ATGACGATGATATATTACTCAAATCACAGAACCACTTATTCTCTTTCTTTTCTTCTTCTTGGCAAATTATCAAACACCTACCAGGCACCTCCAATGTCACTCTTCATCTTTCTCTTCTTTCTCTTCCTCCTCCCGCCGCCATCGCTCTCTCAAAACGACAACGTAACATGCCCACTCAACACCACCCTCCTCACCACCCTAGGCGGCGGCTCCGAACCATCCTTCGACTCATCCTCAACGTGTCACAACGTCCTCCAAACCCTCCACCTCCTCCAAGCCGACTACCTCCGCCGCCAATCCCGCTTCGTTCCGCCGTTAAACTCCTCCGCCTCATGCTGGTCCACCTTTCAATCCTACATCACCAAATACGAACCCAATTTCGACGTTCGCTCGCGCTGCGGCCTCCAAACCTCCTGGATCTCCTATGGTTGCATGAACATCACCACCCTCCAACAATTCGAATCCGCCGTCCCCGCCGCAACCATCCAAAGCGTTAAAAGTAGCTGCAACCAGTCTTTGGATAACAACGCGCCCTGCGCCAGCTGCACCACCAGCTTGTCCAACTTGCAGTCCTACTTGAACGGCTCCACCGTCGGCAACGTCTCCGAGTGCAGGTCCTACACTTCTATCTACGCTGCTTATCTTGCTGACCCTACTGATACCGGCACCGCTAAGTGCTTATTCGGCCTTGATTTCTCTTCCTCCGGGAAAAGCAACAACGGTAAGACGGTTCTTATTGCTGTTGTTGTTTCTGTTTTCAGTGTTTTGGGGTTGGTTTTGTTTGGTGGGTTCTGGGGTTACTTGAGGTGGAAGAAGAAGAGGAACGAGATTACGAAGAAAGGTGGTGTTGGCATGGATCAGATTGGTTTGAGTTCTTCTGGATTGGACTCCATGAACCAGAGCACTACCTTGATTAGGTTCGGCTTCGATGAAATCAAGAGAGCCACCAGGAATTTCTCAAGGGATAACATAATTGGGAGTGGCGGTTATGGCAACGTTTACAAGGGTTTGTTGAACGATGGATCTCAGGTTGCTATGAAGAGGTTCAAGAATTGTTCTGTTGCCGGTGATGCTAGCTTCACTCATGAGGTTGAGGTCATTGCCAGCGTTAGGCATGTCAATCTTGTTGCTTTGAGAGGCTATTGTACGGCCACAACTAATTTAGAGGGTCATCAGAGGATTATTGTGACTGATTTGATGGAAAATGGGAGTCTCTATGATCACTTGTTTGGGTCAAGAGGGAAGAAATTGAGTTGGCCCCTTCGGCAGAAGATAGCTCTCGGAACTGCTAGGGGTTTGGCTTATCTGCATTACGGCGCGCAGCCGTCAATCATTCACAGGGACATTAAGGCTAGCAATATTCTTCTTGATGAGAAATTTGAGGCCAAGGTCGCAGATTTCGGGTTGGCAAAGTTCAATCCGGAGGGAATGACACATATGAGTACTAGAGTTGCTGGTACCATGGGGTATGTTGCGCCGGAGTATGCGCTCTATGGGCAATTGACAGAGAGGAGTGATGTTTTCAGCTATGGTGTCGTGCTTCTTGAATTGTTGAGTGGGAGGAAGGCTCTGGAGACGGACAGCGATGGACAGCCAAATGCACTGACTGACTTGGCCTGGTCATTGGTTAGGGAAGGTAAATCATTGGATGTTATTGAAGATGGAATGCCGGAACAGGGCGCGCCGGAGGTTCTTGAGAAGTATGTGTTGGTTGCTGTGCTGTGCTCACATCCTCAGTTGTATGCTAGGCCTACAATGGACCAGGTTGTTAAGATGCTGGAGACCGATGAGTCTGTGCCTTCGGTTATGGAAAGGCCAATACCTTTTACTGCTGGGAGGATTGATATTGAGAAATCTGCTCTAAGCAACTCAGGGCAGCTTTGTAGTCCAACCGGTTATCAGGCATTCACAATGCAGAGTAAACACCTTTCGGATCCTAATAAGCAAGAAGAGCTTAAGGAAGAAGAAGAGGGAAACTCTGAGTCCGGGACCATGAGCGTGGATTGA 2007 0.4898 MTMIYYSNHRTTYSLSFLLLGKLSNTYQAPPMSLFIFLFFLFLLPPPSLSQNDNVTCPLNTTLLTTLGGGSEPSFDSSSTCHNVLQTLHLLQADYLRRQSRFVPPLNSSASCWSTFQSYITKYEPNFDVRSRCGLQTSWISYGCMNITTLQQFESAVPAATIQSVKSSCNQSLDNNAPCASCTTSLSNLQSYLNGSTVGNVSECRSYTSIYAAYLADPTDTGTAKCLFGLDFSSSGKSNNGKTVLIAVVVSVFSVLGLVLFGGFWGYLRWKKKRNEITKKGGVGMDQIGLSSSGLDSMNQSTTLIRFGFDEIKRATRNFSRDNIIGSGGYGNVYKGLLNDGSQVAMKRFKNCSVAGDASFTHEVEVIASVRHVNLVALRGYCTATTNLEGHQRIIVTDLMENGSLYDHLFGSRGKKLSWPLRQKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGRKALETDSDGQPNALTDLAWSLVREGKSLDVIEDGMPEQGAPEVLEKYVLVAVLCSHPQLYARPTMDQVVKMLETDESVPSVMERPIPFTAGRIDIEKSALSNSGQLCSPTGYQAFTMQSKHLSDPNKQEELKEEEEGNSESGTMSVD 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00261 668 SUPERFAMILY Protein kinase-like (PK-like) 296 594 IPR011009 -
Aip06g00261 668 Pfam SPARK 52 204 IPR043891 -
Aip06g00261 668 MobiDBLite consensus disorder prediction 644 660 - -
Aip06g00261 668 PANTHER OS01G0253100 PROTEIN 54 646 IPR045271 GO:0004714|GO:0006468
Aip06g00261 668 MobiDBLite consensus disorder prediction 637 668 - -
Aip06g00261 668 Gene3D Phosphorylase Kinase; domain 1 288 398 - -
Aip06g00261 668 SMART serkin_6 319 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00261 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Aip06g00261 668 CDD STKc_IRAK 325 594 - -
Aip06g00261 668 Gene3D Transferase(Phosphotransferase) domain 1 400 604 - -
Aip06g00261 668 ProSiteProfiles Protein kinase domain profile. 319 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00261 668 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524
Aip06g00261 668 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 54 646 - -
Aip06g00261 668 Pfam Protein kinase domain 320 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00261 Aip-Chr6 3054944 3057297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00261 38 638 Receptor kinase-like Gene Family AT2G48010 62.848 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Aip06g00261 Pkinase 7.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00261 - - gmx:100819453 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00261 06 3054944 3057297 Aip06g00261 06 3054944 3057297 ECH
Aip06g00261 06 3054944 3057297 Aip02g02856 02 104672919 104674934 ECH