Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00233 ATGGTGTTGTGCAATCCATCAACACAACCAATCATAAATGTTCCTTGCAATGGTCCAAAACTGATCAACGCTAAGCAGAAAGAGAAGGTGGTTTTGGTCATGGGAGCAACCGGGACCGGAAAATCACGGCTCTCCATCGACCTTGGAACATGTTTTCCATCGGAAATCATCAACTCCGACAAAATTCAAGCCTATGAAGGACTAGAAATAGCCACAAACAAGGTCACAAAGGAAGAACAACGAGGCGTGCCACATCATTTGTTAGGGATACACAATCCCTACTCTGAGTTCACGGCCAATGATTTCTGCGACATGGCCTCGTTGGCCATGGAATCAATCATTGGCCGCGAACAACTCCCGATCATAGTCGGGGGGTCGAATTCCTATGTGGAAGCATTAGTGGAAAGATTTGGATCAAGGTATGATTGGTTTTTTCTTTGGTTGGATGTATCAATGCCAGTTCTTCATTCCTATGTATCAAGAAGAGTGGATGAGATGGTTGAGAAGGGAATGGTGAATGAATTAAGACCCTTTTTCAGTCCCAACGGGGATTACACAAAAGGGATAAGAAAGGCAATTGGGGTGCCGGAATTCGACATGTTCTTTCGAAGTGAAGCGACAACATGGGATGAGAGAAGGAAGCAGAGGTTGTTTGATGAGGCGATCAGCGGAGTGAAGAAGAACACGTGCACATTGGCGTGCAAGCAGTTTGAGAGGATTGAGAGGCTTAGGAATGTGAAGAGATGGAACATGCAGCGTGTGTGTGCCACAAGAGTGTTCGAAATGCATGGAAATGGTGATGATGATGAAGCAGATGAAGCGTGGAGGAAGATTGTGGCAGAGCCAAGTGCGAGATTAGTGGCACAGTTTCTATACAATGAAGCCATTAATAATAATAATAATAATTATTCTGGGATTAGTTCGCGTGCCAGGTTCTTCTAA 942 0.4469 MVLCNPSTQPIINVPCNGPKLINAKQKEKVVLVMGATGTGKSRLSIDLGTCFPSEIINSDKIQAYEGLEIATNKVTKEEQRGVPHHLLGIHNPYSEFTANDFCDMASLAMESIIGREQLPIIVGGSNSYVEALVERFGSRYDWFFLWLDVSMPVLHSYVSRRVDEMVEKGMVNELRPFFSPNGDYTKGIRKAIGVPEFDMFFRSEATTWDERRKQRLFDEAISGVKKNTCTLACKQFERIERLRNVKRWNMQRVCATRVFEMHGNGDDDEADEAWRKIVAEPSARLVAQFLYNEAINNNNNNYSGISSRARFF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00233 313 Gene3D - 27 291 IPR027417 -
Aip06g00233 313 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 23 297 - -
Aip06g00233 313 Pfam IPP transferase 63 137 - -
Aip06g00233 313 Pfam IPP transferase 140 238 - -
Aip06g00233 313 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 23 297 IPR039657 -
Aip06g00233 313 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 142 IPR027417 -
Aip06g00233 313 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 152 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00233 Aip-Chr6 2459168 2460109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00233 138 295 C2H2 Transcription Factor Family AT2G27760 29.348 4.44e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00233 K10760 - gmx:100777757 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00233 06 2459168 2460109 Aip06g00233 06 2459168 2460109 ECH
Aip06g00233 06 2459168 2460109 Aip02g02790 02 103914382 103915715 PCT