Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00196 ATGCGAAGGAGGAGAAGGAACAACCTCACGCACTTGGACCAATGCTTCTCAAATTTCATAAACCCTTTCATTCTTCATCAATCTCAATTATCCTCTAATAATAATAATTCCCCGCCATCATCCATCGTCAATCACGATCGCCACCAGATCAATCACAACCGTCCATCATCATCAACCTCAATCATCAAGAACTTCAACACTATCTACGACAATAACACCACCGAACCCGAACCCGAACCTGCAGACTTCGCCACCGCATTTGCCTCCCAACGCTTCTTCTTCTCCTCCCCCGGCCGATCCAACTCCATCGTCGAATCCACCCCGTCCTCTTCCTCCTCTTCATCACTAACTTCGTCGTTAACCACCACTGCGCCGGCGGAAGCTTCCTTGGCTTCGGCCGGCGACGAAAGTAAGGCGGTGTTGTTTGAGGGGAGCGTGGCGGTGCCGACGTACTCGCCGGATCCTTACTTGGACTTCCGGCAATCCATGGAGGAGATGGTGGAGGCTCGACCGGAGCTCATGGCGGACGTGAAGTCCAACTGGCACGTGCTGCAGGAGCTTCTGATGTGCTACCTTGCTCTGAACCCGAAGAGCACGCACAAATTCATTCTCGGTGCCTTCGCTGATCTTCTCGTTACACGCATGGCGTTTTCTGACGGTGGCGGTGGCGGTGGCGAAGAATAA 684 0.5307 MRRRRRNNLTHLDQCFSNFINPFILHQSQLSSNNNNSPPSSIVNHDRHQINHNRPSSSTSIIKNFNTIYDNNTTEPEPEPADFATAFASQRFFFSSPGRSNSIVESTPSSSSSSSLTSSLTTTAPAEASLASAGDESKAVLFEGSVAVPTYSPDPYLDFRQSMEEMVEARPELMADVKSNWHVLQELLMCYLALNPKSTHKFILGAFADLLVTRMAFSDGGGGGGEE 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00196 227 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 146 212 IPR006458 -
Aip06g00196 227 ProSiteProfiles OVATE domain profile. 148 213 IPR006458 -
Aip06g00196 227 PANTHER TRANSCRIPTION REPRESSOR OFP12 11 217 - -
Aip06g00196 227 Pfam Transcriptional repressor, ovate 152 213 IPR006458 -
Aip06g00196 227 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 11 217 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00196 Aip-Chr6 2011052 2011735 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aip06g00196 Ovate 3.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00196 - - gmx:102660213 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00196 06 2011052 2011735 Aip02g00772 02 12077566 12078492 PCT