Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00182 ATGGGTAATAAGGAGTGTCCAAATGGCGTGGCGATTCCGCCGCCGCAACCGTTTATGAAGTCGTTGAAGTACTCGTTGAAGGAGACGTTCTTCCCGGATGACCCGCTGAGGCAGTTCAAGAACCAGGCGGCGTCAAGGAAGGTGGTGCTGGCACTGCAGTACTTCTTGCCGATATGCGAATGGGGACCACGGTACACCCTCAGGTTCTTGAAATCGGACGTTATTGCCGGCATCACCATCGCCAGTTTGGCCATTCCTCAAGGCATCAGTTATGCTAAGCTCGCCAACCTCCCTCCCATTCTTGGACTTTATTCGAGCTTTATACCGCCATTGATATATGCAATGATGGGAAGCTCAAGGGATTTGGCGGTGGGAACGGTGGCCGTTGGATCACTTCTGATGGCGTCGATGTTGGGTAAGGAGGTTAATTACATCCATAACCCGCAGCTCTATCTACACCTCGCTTTCACTGCTACTTTCTTCGCTGGTGTCTTCCAAGCTTCACTGGGTCTCTTTAGGTTAGGGTTCATAGTGGACTTTCTGTCACATGCAAGCATAGTAGGGTTCATGGGAGGAGCAGCAACAGTGGTATGCCTGCAGCAGCTCAAATCAATTCTGGGATTGGAGCGTTTCACACACCACGCTGATCTTGTCTCCGTCATGCGTTCTGTTTTCTCCCAAACTCACCAATGGAGGTGGGAAAGCGCAGTGTTAGGATGCTGCTTCATATTCTTTCTTCTCATCACTAGATACTTCAGCAAACAAAAACCGAAGCTGTTTTGGGTGTCAGCAATGGCGCCATTGACATCTGTAATTTTGGGAAGTCTCCTTGTCTATTTCACCCACGCCGAGAAGCACGGCGTTCAAGTGATAGGAGAATTGAAGAAGGGGCTAAATCCAGCATCAGTGACAGATTTGATATTTGTGTCGCCTTATATGAACACTGCCATCAAAACTGGCATTATCATCGGCATTATAGCCCTTGCGGAAGGAATAGCAGTTGGAAGAAGCTTTGCAATGTTTAAGAATTACCATATTGATGGCAACAAAGAGATGATAGCTATTGGCACCATGAACATTGTTGGTTCTTTCACCTCTTGCTACCTTGCAACCGGACCATTTTCGCGTTCGGCTGTAAACTACAATGCTGGGTGCAAGACTGCAGCATCAAACATAGTAATGGCAATAGCAGTGATGTTGACATTGTTATTCCTAACACCATTGTTCCATTACACTCCACTTGTGGTACTATCTGCCATCATAGTATCTGCAATGCTCGGCCTCATAGATTATGAAGCAGCAATCCACCTCTGGAAAATCGACAAATTCGATTTCTTAGTCTGCATTAGTGCATATATCGGTGTCGTCTTTGGCAGTGTCGAAATTGGTTTAGTAATAGCAGTAGCAATATCTGTACTTCGTGTACTGTTATTTGTTGCAAGGCCAAGGACATTTGTTTTAGGTAACATTCCAAATACTGGAGCATATAGAAATGTGGAACAATATCCCAATGCAAAACACATTCCTGGAATGCTAATTCTTGAAATTGATGCACCAATTTACTTTACCAATGCAAGCTATTTAAGAGAGAGGATCACCAGGTGGATTGATGAAGAGGAGGACAGAATCAAAGCTTCAGGACTGAACAGTTTGCAGTATGTGATATTGGATATGACTGCTGTTGCAAACATTGACACAAGTGGAATAAGTATGTTTGAAGAGGTCAAAAAGATTGTTGAGAGAAGAGGACTACAATTGGTTCTGGTGAATCCTGGGAGTGAGGTGATGAAGAAACTGCATAAAGCAAAGTTCCTTGATGAAATAGGGCAGAGGTGGGTGTACCTAACAGTTGAAGAGGCTGTTGCAGCATGCAACTTCATGCTCCATACATATCAACCAAACCCCAAGAAAGATGAATCAGGAGGAGGATGGAACAATGTCTGA 1944 0.4496 MGNKECPNGVAIPPPQPFMKSLKYSLKETFFPDDPLRQFKNQAASRKVVLALQYFLPICEWGPRYTLRFLKSDVIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGKEVNYIHNPQLYLHLAFTATFFAGVFQASLGLFRLGFIVDFLSHASIVGFMGGAATVVCLQQLKSILGLERFTHHADLVSVMRSVFSQTHQWRWESAVLGCCFIFFLLITRYFSKQKPKLFWVSAMAPLTSVILGSLLVYFTHAEKHGVQVIGELKKGLNPASVTDLIFVSPYMNTAIKTGIIIGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIVGSFTSCYLATGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYEAAIHLWKIDKFDFLVCISAYIGVVFGSVEIGLVIAVAISVLRVLLFVARPRTFVLGNIPNTGAYRNVEQYPNAKHIPGMLILEIDAPIYFTNASYLRERITRWIDEEEDRIKASGLNSLQYVILDMTAVANIDTSGISMFEEVKKIVERRGLQLVLVNPGSEVMKKLHKAKFLDEIGQRWVYLTVEEAVAACNFMLHTYQPNPKKDESGGGWNNV 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00182 647 Gene3D STAS domain 481 626 IPR036513 -
Aip06g00182 647 CDD STAS_SulP_like_sulfate_transporter 502 617 - -
Aip06g00182 647 SUPERFAMILY SpoIIaa-like 503 624 IPR036513 -
Aip06g00182 647 Pfam STAS domain 502 620 IPR002645 -
Aip06g00182 647 PANTHER SULFATE TRANSPORTER 1 644 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip06g00182 647 TIGRFAM sulP: sulfate permease 57 620 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip06g00182 647 Pfam Sulfate permease family 70 450 IPR011547 GO:0016021
Aip06g00182 647 ProSitePatterns SLC26A transporters signature. 99 120 IPR018045 GO:0008271|GO:0008272
Aip06g00182 647 ProSiteProfiles STAS domain profile. 501 624 IPR002645 -
Aip06g00182 647 PANTHER SLC26A/SULP TRANSPORTER-RELATED 1 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00182 Aip-Chr6 1867010 1873735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00182 10 647 Inorganic Solute Cotransporters AT4G02700 68.701 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00182 K17471 - gmx:100791091 1123.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00182 06 1867010 1873735 Aip06g00182 06 1867010 1873735 ECH
Aip06g00182 06 1867010 1873735 Aip02g00798 02 12528907 12536234 PCT