Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00173 ATGTCGAGCTCCAGCAGCCATAATCTAAATGCTACTCCACTCTTCTTTGACCTCGCCAACTCCTTTACCAGACTCACTTCTCCCCCATTAACCTCACCAAAACAACGCTGGCGTTTCGCCTATACCAAAATCTATTCTGGAAGAGTCTTTCTGTCCCTTGCGGAAGAGATCATCTCCAAAAGAAATCACAATCGATTCCTTCTTCGTGATGATATAATCGAGCCTCTGGTTCACTGCAACAATTTCTTGCTGGTTGTTCCTGATGATGCTGATAAATCCAAGCTTCTTAACATGGTTAAGGACAGAAGCTTGGACTCTCTTGCTTCCTTTGGAGGCGTGGAGGCTGTAGCTTATATCATTGGAACTGTTCCATCGAAGGGAATTGACGAGAAAGAAGAAGAAATTGCCAAGCGTCGCGATATCTTTGGCTCCAACACTTACCCTCGTCCGCCGCCAAAAGGACTCCTCCACTTTGTTCTTGAAGCCTTCAATGACACCACAATAATCATCCTTCTTGTTTGCGCCGGCCTTTCTCTCGGCTTTGGAATCAAACAGCACGGTGCAGGGGAAGGTTGGTATGAAGGTGGAAGCATATTCGTGGCGGTGTTGTTGGTGGTTGTTGTAAGCTCAGTCAGCAACTTGAGGCAGGAGAGGCAGTTTCACAAGCTGTCCAAGATTAGCAGTGACATCAAGGTCGATGTTGTGAGGAATGGAAGGCCGCAACAGATTTCGATTTTCGACGTTCTTGTGGGAGATATCGTTTCACTCAAGATTGGGGATCAAGTTCCCGCTGATGGATTGTTCATATCAGGTCATTCCCTTCATGTTGATGAATCGAGCATGACAGGGGAGAGTGATCATGTCGAAATTGAGCCGTTAAATAGTCCTTTCTTGTTGTCCGGCGCCAAAGTGGTCGACGGTTATGCAACAATGATGGTGACGTCCGTCGGAACTAACACGGCGTGGGGACAGCTGATGAGCACGGTATCAAGAGGTGACACGGAGGAGAGGACGCCGTTGCAGGCGCGTCTCGATAGCTTGACTACATCGATAGGAAAAGTAGGCCTCTCGGTTGCACTCCTTGTGTTTGTTGTAATGCTTATTCGTTATTTTACTGGAAACACCAGCAGTGACGACGGTTATACAGAGTTCAAGAAAGGTAGTACTGATTTGAATGATGTGTTCAATGCTGTTGTGAAGATAATTGCGGTTGCAGTCACCATTGTGGTCGTGGCGATCCCTGAAGGATTGCCATTGGCTGTCACTCTCACCTTGGCTTATTCCATGAAGAGAATGATGGCAGATCAGGCTATGGTGAGGAAACTCTCTGCTTGCGAAACTATGGGGTCGGCAACGGTTATATGCACTGATAAAACTGGGACTCTGACTCTCAATGAGATGAGAGTGAACAAGTTCTGGTTAGGCCTTGAAAACATCATTGAGAATTATTCCAATGCAATGGCCAAGAGAGTTGTGGAATTGTTCCACCAGGGAATAGGCCTCAATACAACTGGCAGTGTATATAAGCCTTTGCCGGAATCCGGGCCTGAAATCTCTGGTAGCCCTACAGAGAAAGCTATTCTCTTGTGGGCTGTGTCAGATTTAAGCATGGACATGGATGGACTAAAGCAGAAACATGAGATCATCCATGTTGAAACGTTTAACTCGGAGAAGAAACGAAGCGGGGTAGCAGTAAGGAAGAAGAGTGACAATACAGTACATGTACATTGGAAAGGTGCTGCTGAGATGATACTTGCAATGTGTTCTAACTACATTGATTGTAATGGCACAGAGAAGTCCCTTGGTGAAAAAGAACGGGATGAAATTGAGAAAATAATTCAGGGAATGGCAGCTAGTAGCCTAAGATGCATTGCTTTTGCTCACATTGAAATCGACTACAGCGATGATAAGCTACTAAGAGAAGATGGCTTGACATTGCTAGGAATCGTCGGCCTTAAGGATCCATGCCGGCCGGAAGTCAAGAAGGCTGTGGAAACTTGCAAGTATGCAGGTGTTGATATCAAGATGATCACCGGAGATAACTTATTCACGGCAAAGGCAATAGCAACAGAATGTGGAATACTAGACCTTAGTGATGATGTAGCCAAGGGACAAGTGGTGGAAGGTGAGGAATTTCGGAACTACACGGAGGAAGAGAGAATGGAGAAAGTAGATGATATTCGAGTGATGGCGAGATCTTCTCCTTTGGACAAACATTTGATGGTGCAATGTTTAAGAAAGAAAGGCCATGTAGTTGCAGTCACAGGAGATGGCACCAACGATGCGCCTGCGCTAAAAGAAGCTGATATTGGACTTTCTATGGGAATCCAAGGCACTGAAGTTGCCAAGGAAAGTTCTGACATTGTTATCTTGGATGACAACTTCAATTCTGTTGCAACGGTTTTAAGGTGGGGAAGATGTGTATATAACAATATACAGAAATTTATCCAATTTCAACTAACAGTGAATGTTGCAGCACTTGTGATAAATTTTATAGCTGCAGTTTCTGCTGGTGATGTTCCCTTAACAACAGTTCAACTTCTATGGGTTAATCTCATTATGGATACTCTAGGTGCTCTGGCCCTGGCCACGGAACGGCCTACAAAGGAGTTAATGGAGAAACGGCCGGTGGGGCGAACCGAGCCGCTTATCACTAACATTATGTGGAGAAACCTTTTACCTCAAGCTTTGTATCAGATTGCAGTCTTATTGGTTTTCCAATTCAAAGGGAAGGCAATATTCAATGTAGATGAGAAGCTTTTTCATGGCCACTGGCTTGCGTGGACCAACGAGAAAAGAACGAAGCAGAGTCTTCATCGATATGATTCGTTCATTCATTCTATTAGGTGCAGACGGCAAAGAAAGTTTCAATGGTTTTCTAGGTGA 2886 0.4498 MSSSSSHNLNATPLFFDLANSFTRLTSPPLTSPKQRWRFAYTKIYSGRVFLSLAEEIISKRNHNRFLLRDDIIEPLVHCNNFLLVVPDDADKSKLLNMVKDRSLDSLASFGGVEAVAYIIGTVPSKGIDEKEEEIAKRRDIFGSNTYPRPPPKGLLHFVLEAFNDTTIIILLVCAGLSLGFGIKQHGAGEGWYEGGSIFVAVLLVVVVSSVSNLRQERQFHKLSKISSDIKVDVVRNGRPQQISIFDVLVGDIVSLKIGDQVPADGLFISGHSLHVDESSMTGESDHVEIEPLNSPFLLSGAKVVDGYATMMVTSVGTNTAWGQLMSTVSRGDTEERTPLQARLDSLTTSIGKVGLSVALLVFVVMLIRYFTGNTSSDDGYTEFKKGSTDLNDVFNAVVKIIAVAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATVICTDKTGTLTLNEMRVNKFWLGLENIIENYSNAMAKRVVELFHQGIGLNTTGSVYKPLPESGPEISGSPTEKAILLWAVSDLSMDMDGLKQKHEIIHVETFNSEKKRSGVAVRKKSDNTVHVHWKGAAEMILAMCSNYIDCNGTEKSLGEKERDEIEKIIQGMAASSLRCIAFAHIEIDYSDDKLLREDGLTLLGIVGLKDPCRPEVKKAVETCKYAGVDIKMITGDNLFTAKAIATECGILDLSDDVAKGQVVEGEEFRNYTEEERMEKVDDIRVMARSSPLDKHLMVQCLRKKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFNSVATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFIAAVSAGDVPLTTVQLLWVNLIMDTLGALALATERPTKELMEKRPVGRTEPLITNIMWRNLLPQALYQIAVLLVFQFKGKAIFNVDEKLFHGHWLAWTNEKRTKQSLHRYDSFIHSIRCRRQRKFQWFSR 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00173 961 Gene3D - 161 928 - -
Aip06g00173 961 SUPERFAMILY HAD-like 453 860 IPR036412 -
Aip06g00173 961 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 198 373 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip06g00173 961 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 726 835 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip06g00173 961 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 396 491 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip06g00173 961 Gene3D - 465 655 IPR023299 GO:0000166
Aip06g00173 961 SMART Cation_ATPase_N_a_2 109 183 IPR004014 -
Aip06g00173 961 SUPERFAMILY Calcium ATPase, transmembrane domain M 111 935 IPR023298 -
Aip06g00173 961 Pfam Cation transporter/ATPase, N-terminus 111 178 IPR004014 -
Aip06g00173 961 SUPERFAMILY Calcium ATPase, transduction domain A 231 329 IPR008250 -
Aip06g00173 961 SFLD p-type atpase 437 808 IPR044492 -
Aip06g00173 961 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 101 916 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Aip06g00173 961 Pfam Cation transporting ATPase, C-terminus 840 922 IPR006068 -
Aip06g00173 961 Pfam haloacid dehalogenase-like hydrolase 453 769 - -
Aip06g00173 961 Pfam E1-E2 ATPase 230 433 - -
Aip06g00173 961 PANTHER CALCIUM-TRANSPORTING ATPASE 25 920 - -
Aip06g00173 961 PANTHER CATION TRANSPORTING ATPASE 25 920 - -
Aip06g00173 961 CDD P-type_ATPase_Ca_PMCA-like 135 888 - -
Aip06g00173 961 ProSitePatterns E1-E2 ATPases phosphorylation site. 457 463 IPR018303 -
Aip06g00173 961 PRINTS P-type cation-transporting ATPase superfamily signature 755 774 - -
Aip06g00173 961 PRINTS P-type cation-transporting ATPase superfamily signature 779 791 - -
Aip06g00173 961 PRINTS P-type cation-transporting ATPase superfamily signature 670 680 - -
Aip06g00173 961 PRINTS P-type cation-transporting ATPase superfamily signature 648 659 - -
Aip06g00173 961 PRINTS P-type cation-transporting ATPase superfamily signature 455 469 - -
Aip06g00173 961 PRINTS P-type cation-transporting ATPase superfamily signature 277 291 - -
Aip06g00173 961 PRINTS H+-transporting ATPase (proton pump) signature 787 812 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip06g00173 961 PRINTS H+-transporting ATPase (proton pump) signature 609 627 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip06g00173 961 PRINTS H+-transporting ATPase (proton pump) signature 755 771 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip06g00173 961 Gene3D - 132 330 - -
Aip06g00173 961 Gene3D - 452 800 IPR023214 -
Aip06g00173 961 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 461 660 IPR023299 GO:0000166
Aip06g00173 961 SFLD Haloacid Dehalogenase 437 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00173 Aip-Chr6 1732239 1736164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00173 34 920 Primary Pumps ATPases AT3G63380 68.456 0.0 1169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00173 K01537 - gmx:100790034 1370.91