Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00161 ATGGACACCCACTCCTCTCACGGCGCTGGGCCCCTCCGTTCCCGGAGCTCGCAGTCCCCTTCTCCCTCTCACTCGGCCTCCGCCTCCGCCACCTCTTCCATCCACAAGCGCAAGCTCGCGTCTGAAGACCACGCGCCACCCTTTCCCCCTTCCTCCTTCTCCGCCGAGACCCGCGACGGCGCTCTCACTTCCAACGACGACCTCGAGAGCATCTCCGCCCGCGGCGCAGACTCAGATTCCGACGCTGACGACTCCGAGGACGCAGTCGTCGACGACGACGAGGACGACTACGACAATGACTCCTCCATGCGCAACTTCACCGCCTCCAGGCTCGACGGAAGTGCTGGCGCCGGTGGAGCCTCTGCACCGCGCAACACCAAGCTCAAGACCGAAAACTCAGTCACCGTGAAGATTGAGAGCTCCGACGGTGTCAACAAGGACGCTGGCGTAGCTGGAAATTCCGCCGCCGTGGGCACAGTTGCCACCGCCGGATCCGTCCCCGGTATCGTGGTGAAGGAAGATGTTAGCAAGATATTTACGGATAATTTGCAGACGAGTGGAGCTTACAGTGCGAGAGAAGAGAGTCTGAAGAAAGAGGAGGAAGCGGGAAGGCTCAAATTTGTGTGCTACTCAAATGACGGTGTTGATGAGCATATGGTTTGGTTAATAGGATTGAAGAATATATTTGCTAGGCAACTTCCCAATATGCCAAAGGAGTACATTGTCCGACTTGTTATGGATAGGAGCCATAAGTCTGTAATGGTTATAAGGCGGAATCATGTTGTTGGAGGCATTACATATCGGCCATATGTAAGCCAGAAGTTTGGTGAGATAGCCTTTTGTGCAATTACAGCTGATGAGCAAGTAAAAGGTTATGGTACTAGATTGATGAATCACTTAAAACAGCATGCACGTGATGTAGATGGGCTGACACATTTTTTAACTTATGCTGACAACAATGCTGTTGGATATTTTATCAAACAGGGATTTACGAAGGAGATTCACTTGGAGAAAGATAGATGGCAAGGGTATATAAAAGACTATGATGGAGGAATTCTCATGGAATGCAAGATTGATCCAAAGCTCCCTTATATCGATCTATCAACAATGATTCGTCGTCAACGACAGGCTATTGATGAAAAGATCAGAGAGTTGTCAAATTGTCACATTGTTTATGCTGGCATTGATTTTCAGAAGAAAGAAGCTGGAATTCCTAAAAAAATTGTCAAAGTTGAGGACATCCCTGGATTGAGAGAGGCTGGTTGGACCCCTGATCAGTGGGGTCATTCAAGATTCAGACTAAGCAACGCTACAGACAATGCTACAAATATGAAGCATTTGACAGCAATCCAATTCTTGTATAACCTGATTTCTTTGGTACAGTCAATGCATGATCATACTGATGCTTGGCCATTCAAGGAACCAGTTGATGCACGAGACGTTCCTGATTATTATGACATAATTAAAGATCCAATAGATCTGAAGACAATGACTAAGAGGGTGGAATCAGAACAATATTATGTGACATTTGAGATGTTTGTTGCTGATGTGAAGAGAATGTTTCAGAATGCACGCACATATAACTCTCCTGAAACCATATATTACAAATGTGCTACAAGGTTAGAATTACATTTTCAGAGTAAAGTGACATCGGGTGTCCAATCTGCCTTACTCTCATCAATCCATTCATTCGGTTAA 1698 0.4676 MDTHSSHGAGPLRSRSSQSPSPSHSASASATSSIHKRKLASEDHAPPFPPSSFSAETRDGALTSNDDLESISARGADSDSDADDSEDAVVDDDEDDYDNDSSMRNFTASRLDGSAGAGGASAPRNTKLKTENSVTVKIESSDGVNKDAGVAGNSAAVGTVATAGSVPGIVVKEDVSKIFTDNLQTSGAYSAREESLKKEEEAGRLKFVCYSNDGVDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYIDLSTMIRRQRQAIDEKIRELSNCHIVYAGIDFQKKEAGIPKKIVKVEDIPGLREAGWTPDQWGHSRFRLSNATDNATNMKHLTAIQFLYNLISLVQSMHDHTDAWPFKEPVDARDVPDYYDIIKDPIDLKTMTKRVESEQYYVTFEMFVADVKRMFQNARTYNSPETIYYKCATRLELHFQSKVTSGVQSALLSSIHSFG 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00161 565 MobiDBLite consensus disorder prediction 1 35 - -
Aip06g00161 565 PANTHER GH11602P 1 556 IPR037800 GO:0004402
Aip06g00161 565 MobiDBLite consensus disorder prediction 1 134 - -
Aip06g00161 565 PRINTS Bromodomain signature 467 480 IPR001487 GO:0005515
Aip06g00161 565 PRINTS Bromodomain signature 516 535 IPR001487 GO:0005515
Aip06g00161 565 PRINTS Bromodomain signature 481 497 IPR001487 GO:0005515
Aip06g00161 565 MobiDBLite consensus disorder prediction 80 99 - -
Aip06g00161 565 CDD Bromo_gcn5_like 452 549 - -
Aip06g00161 565 CDD NAT_SF 252 306 - -
Aip06g00161 565 Pfam Acetyltransferase (GNAT) family 252 330 IPR000182 GO:0016407
Aip06g00161 565 Gene3D - 429 557 IPR036427 GO:0005515
Aip06g00161 565 MobiDBLite consensus disorder prediction 56 71 - -
Aip06g00161 565 ProSiteProfiles Bromodomain profile. 464 535 IPR001487 GO:0005515
Aip06g00161 565 SMART bromo_6 445 554 IPR001487 GO:0005515
Aip06g00161 565 Pfam Bromodomain 459 539 IPR001487 GO:0005515
Aip06g00161 565 ProSitePatterns Bromodomain signature. 469 527 IPR018359 -
Aip06g00161 565 Gene3D - 201 365 - -
Aip06g00161 565 PANTHER BNAC04G26160D PROTEIN 1 556 - -
Aip06g00161 565 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 214 364 IPR016181 -
Aip06g00161 565 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 212 359 IPR000182 GO:0016407
Aip06g00161 565 SUPERFAMILY Bromodomain 450 549 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00161 Aip-Chr6 1620935 1628962 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aip06g00161 Bromodomain 2.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00161 K06062 - zju:107425866 833.558