Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00140 ATGGAGGAAGTTGAAGAAGCTAACAGAGCTGCTGTTGAGAGCTGCCATAGAGTTTTAACAGTGTTGTCTCAGCCTCAGGATCAAGTTCATTATAGGAATTTAATGGTAGAAACTGGTGAAGCTGTGGTGAGGTTCAAGAAAGTTGTTTCCTTGCTTAGTAATAGTTTGGGTCATGCAAGAGTTAGGAAGCATAAGAAGCTTCAAGTACCATTTTCTCAAAGCATCCTCTTGGATAGCCCAATTTGCACAAGAAAAAAGCATCAATCTAAGTACTTGAAATTTCCTCAGGCTGATTTTCATGATAATTCAGCTCAGGAACTGGGTTTAACAGTAGGGAAATCGCTAAGTCTGGTTGCGAAACCGGCCTTGGAATTGAGCTCCAATGGCAATGGGAATGGGAAGAGTCCTCTTCAACTTGCTCAACAACTCTCATCAACACACTATCATATTCTTCAGCAGCAGCAGCAACAACAAAGGGCATTGCTGCTGCATCATCAGCAGCAGCAGCAACAAATGAAACATCAAGCCGAAATTATGTACAGAAGGAACAACATTAACAATAGCAATAACTGCAGCAGCAACAACAACAGTGTCATAAATCTGAATTTTGATAATAGCTCTAGCTGCACACCAACAATGTCGTCTACTAGGTCTTTTATTTCTTCCCTTAGCATAGACGGGAGCGTGGCGAACGTGGAAGGAAGCGCCTTCCATCTAATCGGAGCTGCGCGCTCTTCTGATCAGAATTCCCAACAGCACAAGAGAAAATGTTCTGCTAGAGGCGACGAGGCGAGCGGTGGCAAATGCCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATCAAGGTGCCTGCTATCAGCAACAAACTTGCAGATATCCCTCCTGATGATTATTCGTGGAGGAAGTACGGGCAGAAGCCCATCAAGGGGTCTCCACACCCCAGGGGTTATTATAAGTGCAGCAGCATGAGAGGGTGCCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCTTCAATGCTAATAGTTACCTATGAAGGGGAGCACAACCACCCTAAATTATCAACACAATCTGCAAACGCATGA 1095 0.4447 MEEVEEANRAAVESCHRVLTVLSQPQDQVHYRNLMVETGEAVVRFKKVVSLLSNSLGHARVRKHKKLQVPFSQSILLDSPICTRKKHQSKYLKFPQADFHDNSAQELGLTVGKSLSLVAKPALELSSNGNGNGKSPLQLAQQLSSTHYHILQQQQQQQRALLLHHQQQQQQMKHQAEIMYRRNNINNSNNCSSNNNSVINLNFDNSSSCTPTMSSTRSFISSLSIDGSVANVEGSAFHLIGAARSSDQNSQQHKRKCSARGDEASGGKCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPKLSTQSANA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00140 364 ProSiteProfiles WRKY domain profile. 291 357 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip06g00140 364 MobiDBLite consensus disorder prediction 244 275 - -
Aip06g00140 364 Pfam Plant zinc cluster domain 254 294 IPR018872 -
Aip06g00140 364 SUPERFAMILY WRKY DNA-binding domain 294 356 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip06g00140 364 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 2 363 - -
Aip06g00140 364 MobiDBLite consensus disorder prediction 249 269 - -
Aip06g00140 364 Pfam WRKY DNA -binding domain 298 355 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip06g00140 364 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 363 IPR044810 GO:0003700
Aip06g00140 364 SMART WRKY_cls 296 356 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip06g00140 364 Gene3D WRKY domain 282 356 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00140 Aip-Chr6 1371417 1373988 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00140 1 361 WRKY Transcription Factor Family AT2G30590 55.528 7.65e-119 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip06g00140 WRKY 3.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00140 - - gmx:100170681 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00140 06 1371417 1373988 Aip06g00140 06 1371417 1373988 ECH