Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00137 ATGTCCACCGATGAACTTGTCAAGCTCTTCACTGCACGCGCCCGCAGAAGATTTCAACGCGGTTTGACGCGGAAGCCTATGGCGCTAATCAAGAAACTCCGTAAGGCGAAAAGGGAGGCTCCAGCCGGTGAAAAGCCAGAGCCCGTCAGGACTCACCTACGCAACATGATCATTGTGCCTGAAATGATTGGTAGCATCATTGGTGTCTACAATGGTAAGACCTTCAATCAAGTTGAAATCAAACCAGAAATGATAGGCCACTATCTAGCTGAATTCTCAATCTCTTACAAGCCTGTTAAGCATGGAAGGCCTGGTATTGGTGCAACTCACTCCTCGAGGTTCATTCCTCTCAAGTGA 357 0.4818 MSTDELVKLFTARARRRFQRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00137 118 SUPERFAMILY Ribosomal protein S19 21 102 IPR023575 GO:0003735|GO:0005840|GO:0006412
Aip06g00137 118 ProSitePatterns Ribosomal protein S19 signature. 71 95 IPR020934 GO:0003723
Aip06g00137 118 PIRSF RPS19p_RPS19a_RPS15e_RPS19o 6 118 IPR002222 GO:0003735|GO:0005840|GO:0006412
Aip06g00137 118 Gene3D 30s Ribosomal Protein S19; Chain A 1 118 IPR023575 GO:0003735|GO:0005840|GO:0006412
Aip06g00137 118 TIGRFAM uS19_arch: ribosomal protein uS19 1 118 IPR005713 GO:0003735|GO:0006412|GO:0015935
Aip06g00137 118 PRINTS Ribosomal protein S19 family signature 71 83 IPR002222 GO:0003735|GO:0005840|GO:0006412
Aip06g00137 118 PRINTS Ribosomal protein S19 family signature 51 70 IPR002222 GO:0003735|GO:0005840|GO:0006412
Aip06g00137 118 PRINTS Ribosomal protein S19 family signature 83 98 IPR002222 GO:0003735|GO:0005840|GO:0006412
Aip06g00137 118 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 1 118 IPR002222 GO:0003735|GO:0005840|GO:0006412
Aip06g00137 118 Hamap 30S ribosomal protein S19 [rpsS]. 14 107 IPR002222 GO:0003735|GO:0005840|GO:0006412
Aip06g00137 118 Pfam Ribosomal protein S19 16 101 IPR002222 GO:0003735|GO:0005840|GO:0006412
Aip06g00137 118 PANTHER BNAA03G55820D PROTEIN 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00137 Aip-Chr6 1357400 1359370 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00137 1 118 Cytoplasmic Ribosomal Protein Gene Family AT5G09500 90.678 4.11e-76 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00137 K02958 - gmx:100777379 235.343