Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00131 ATGGAAGGGAAGTATTATGTGGCAAGAAACAACAAGAAGCAGCACAAAGAGGACAACAATAACAATAATAATACAAGCTTTGAAATGGAGGAGCAGCATCGTAGTAGTATTTGTTCATCATCGTGGCCTGCGAGGAACTATGGGTGTAGCTTTTGCAAGAGAGAGTTCAAATCCGCACAAGCATTGGGTGGACACATGAATGTTCATAGAAGAGATAGGGCAAGATTGAGATCATCATCATCATCATCATCAATATGGCTTTCTGATAAACCTAATAAACCTAACCCTAGCAGCATCCTAAAGCCTAATAATAACAAGCACCCAATAATACCTTCCTCTTCATCTCTTTATTATAGCCCTAGTAGCATTACTTTGTGCTCTTATTCTTCTTCAGCTTCCACAAGTAGCTGCGATAAGAAACCAACACTCATCACATCACACCTTCTTCCTCCCCCTCAAACGATCAGTAACAACACCACAGTCACAGCAAGGTGGAGTAGTAATGCTATAATGGAAGATGATGATGAGCACAACCACAACATCGCCTTGGAATTGGGAATAGGCTTGCTTAAGCACCCAACTAACAACTTAGATTTGGAGCTTCGATTAGGCCAATGA 618 0.411 MEGKYYVARNNKKQHKEDNNNNNNTSFEMEEQHRSSICSSSWPARNYGCSFCKREFKSAQALGGHMNVHRRDRARLRSSSSSSSIWLSDKPNKPNPSSILKPNNNKHPIIPSSSSLYYSPSSITLCSYSSSASTSSCDKKPTLITSHLLPPPQTISNNTTVTARWSSNAIMEDDDEHNHNIALELGIGLLKHPTNNLDLELRLGQ 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00131 205 MobiDBLite consensus disorder prediction 1 19 - -
Aip06g00131 205 PANTHER OS07G0101800 PROTEIN 9 204 - -
Aip06g00131 205 PANTHER TRANSCRIPTIONAL REGULATOR SUPERMAN 9 204 - -
Aip06g00131 205 MobiDBLite consensus disorder prediction 64 106 - -
Aip06g00131 205 MobiDBLite consensus disorder prediction 78 106 - -
Aip06g00131 205 SUPERFAMILY beta-beta-alpha zinc fingers 44 73 IPR036236 -
Aip06g00131 205 ProSitePatterns Zinc finger C2H2 type domain signature. 49 69 IPR013087 -
Aip06g00131 205 Pfam C2H2-type zinc finger 47 71 - -
Aip06g00131 205 MobiDBLite consensus disorder prediction 1 28 - -
Aip06g00131 205 Gene3D Classic Zinc Finger 26 98 - -
Aip06g00131 205 ProSiteProfiles Zinc finger C2H2 type domain profile. 47 74 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00131 Aip-Chr6 1272332 1272949 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00131 31 204 C2H2 Transcription Factor Family AT3G23130 37.297 4.14e-22 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip06g00131 zf-C2H2_6 8.2e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00131 - - adu:107493056 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00131 06 1272332 1272949 Aip02g00909 02 15325670 15326350 PCT