Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00114 ATGGAATCTACCAACCATAATAATAATCTCCTTCATCATCATCATCTTCTTCAAGACCAACAAAAACCACATGATGATAATAATGTTGAGGCTTGTTCTTCATCTTGCTATGGTGTTGGAAGCAACCATTCTTGGAGCTCACCAAATACAACTATGGTTGGTGATGATAACTTGAAGCCAAACCTGAATGGTTCAATGATCCAAGATTATTTAGGTTACAATAATAATGAAGAGAACAAAGATATGATGATGAGTAATGGGAGGCTCTTAATGAAGAACCTTTCTCAAGAAGAGCAATATTACTCCACTTCTTCCACTAATGCACAAAGTCATTATCATAATTATATTGGTGGTAATAATAATAATATTAATAAGGCCTATATTAGTATATATCCAACCATAAATGTCTCAAATTTGAACCACCCATCAGCAGAAATTTCTTCAAGCATAATGCATCATCATCAGCAGCCCTTAGATCTATTAACCTCAACAACAACAACATCATCATATTCAAAGGATCATCATCATCATCATGGTCTTAATGGTCAATTATTTACAGAAAACCTTTTCCATAATATTATTGGTCTTGATGATCATCATCATATGCAGCACTCCACTACTAGTATTCCATCACAACACTTCACCAATAATAATAATGGCATGATGGTAGAAACAAAAAGATCTTCAAGCACTTTGATGGAGTCATCAAATGCATCGAAGAAATCAAGACCCCAATCATCACGCTCTTCATGCCAACACCTTAAGATTAGAAAGGAGAAATTAGGAGATAGGATTGCGGCTCTTCAGCAATTGGTGGCTCCTTTTGGCAAGACAGATACAGCATCCGTACTTCTAGAGGCAATTGGATACATTAAATTCCTTCAAAGCCAAGTGGAGACACTAAGTGTTCCATATATGAAGTCATCAAGGAACCAAATCAGCAGAGGACTCATAATGAGGCAAGGGGTTTCAGCAAGAGATAATATTATGAACTCGGAGGCAAAGCATGAAGACCTTAGAAGCCGAGGCCTCTGCCTTGTACCAATGTCGTGCATGGCATACATAGCCGGCGATGATGGTGGCGGTTGTGGAGCGTGGCAGCAACCGCCAAATTTTGGCGGCCCAACCTAA 1131 0.3846 MESTNHNNNLLHHHHLLQDQQKPHDDNNVEACSSSCYGVGSNHSWSSPNTTMVGDDNLKPNLNGSMIQDYLGYNNNEENKDMMMSNGRLLMKNLSQEEQYYSTSSTNAQSHYHNYIGGNNNNINKAYISIYPTINVSNLNHPSAEISSSIMHHHQQPLDLLTSTTTTSSYSKDHHHHHGLNGQLFTENLFHNIIGLDDHHHMQHSTTSIPSQHFTNNNNGMMVETKRSSSTLMESSNASKKSRPQSSRSSCQHLKIRKEKLGDRIAALQQLVAPFGKTDTASVLLEAIGYIKFLQSQVETLSVPYMKSSRNQISRGLIMRQGVSARDNIMNSEAKHEDLRSRGLCLVPMSCMAYIAGDDGGGCGAWQQPPNFGGPT 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00114 376 PANTHER OS01G0105700 PROTEIN 84 358 - -
Aip06g00114 376 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 255 307 IPR036638 GO:0046983
Aip06g00114 376 MobiDBLite consensus disorder prediction 226 251 - -
Aip06g00114 376 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 84 358 - -
Aip06g00114 376 Coils Coil 251 271 - -
Aip06g00114 376 MobiDBLite consensus disorder prediction 226 252 - -
Aip06g00114 376 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 245 294 IPR011598 GO:0046983
Aip06g00114 376 SMART finulus 255 300 IPR011598 GO:0046983
Aip06g00114 376 CDD bHLH_AtbHLH_like 257 302 IPR045239 -
Aip06g00114 376 Gene3D - 252 315 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00114 Aip-Chr6 1090351 1094734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00114 11 376 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 37.562 7.00e-51 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00114 - - aip:107647881 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00114 06 1090351 1094734 Aip06g00114 06 1090351 1094734 ECH