Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00113 ATGTTAGAATTTGTAGAACTCCCGGATTGTTTTTACCCTAGGGATGCAATTACCATAATAACCCCATGTGCTCCAACACCAAAGCATTCACTCTATCTATCAAATCTTGATGATCAAAAGTTCCTAAGGTTCTCAATTAAGTACTTGTACTTGTTCAAGAAATCAGTGAGCATTGAAGCTTTGAAGTGTTCCTTGTCAAGGGTTCTTGTTGATTACTACCCTTTGGCTGGGAGATTAAGGAAGAACAATAATAATGATGATGATGATCACAAGCTTGAGGTGGATTGCAATGGAGAAGGTGCTGTTCTTGCTGAGGCTTTCATGGATTCAACTATTGAAGACTTGATTGAAGCTTCTAAGGTTCCAAACAAGTCATGGAGGAAGCTTATGTATAAGGTTGAAGCTCAAAGTTTCTTGGATATTCCTCCTCTTGTTCTTCAGGTAACTAATCTCCGTTGTGGGGGCATGATCCTGTGCACCGCGATCAACCACTGTCTATGCGACGGCATAGGCACTTCACAGTTTCTACATGCGTGGGCCCAACTCACCAAGAACCCCAACACTAAATTGACCATTATACCCTTCCATGGGAGACACGTGTTAAAATCTCGTGATCCCCCTCAGGTGAGGTTTCCGCTCCCGGGATACACCAAAACAAAACCCACTCAACAAGTTGAACTCCTTAAGTTGATGCAATCTCAACCGTTAGTTGCCACGTCATTTACCTTTGGATCCCACCAAGTTCTTCAATTGAAGAAACAATGCATTCCCTCCCTAAAATGCACAACCTTTGAGGTCATGGCGGCACACACGTGGCGCTCGTGGATTGGCTCGCTTAACTTAAATTCTGACCTCACAGTGAAATTACTCTTTTCTATTAACATAAGAAAAAGTATGAACCTCCCACAAGGGTATTATGGGAATGGATTTGTTCTAGGATGTGCACAAAGTAAAGTGAAGGATTTAGTGTTGTGTAATAATAATAATAATAATAATAATAATAATAATCATCTTCATCATGGTGTGAAATTGGTTCAACAAGCTAAGGCTACTACTTGGGACAATAATGGTGAGTACATTAGGTCCATGATTGATTTCTTGGAGGACAAGAATGTGAGAACTGATCTTTCTGCTAGTATGGTTATATCACAATGGTCTAAACTAGGGTTAGAAGATTTGGATTTTGGAGAAGGGAAGCCATTGCACATGGGACCTTTAACAAGTGATGTCTATTGCTTGTTCTTACCGGTGGTCGGCGACGCCGACGCGGTTAGGGTTCTCGTGTCGGTGCCGGAAAGTATGGTGGAGAGCTTCCGGCACCACATGATGGTGAAGGAAAGTTGGGAAAGTCATCGTGAGAAGAATAATGAGGATGTTAACACAAATGGATATCAT 1395 0.4172 MLEFVELPDCFYPRDAITIITPCAPTPKHSLYLSNLDDQKFLRFSIKYLYLFKKSVSIEALKCSLSRVLVDYYPLAGRLRKNNNNDDDDHKLEVDCNGEGAVLAEAFMDSTIEDLIEASKVPNKSWRKLMYKVEAQSFLDIPPLVLQVTNLRCGGMILCTAINHCLCDGIGTSQFLHAWAQLTKNPNTKLTIIPFHGRHVLKSRDPPQVRFPLPGYTKTKPTQQVELLKLMQSQPLVATSFTFGSHQVLQLKKQCIPSLKCTTFEVMAAHTWRSWIGSLNLNSDLTVKLLFSINIRKSMNLPQGYYGNGFVLGCAQSKVKDLVLCNNNNNNNNNNNHLHHGVKLVQQAKATTWDNNGEYIRSMIDFLEDKNVRTDLSASMVISQWSKLGLEDLDFGEGKPLHMGPLTSDVYCLFLPVVGDADAVRVLVSVPESMVESFRHHMMVKESWESHREKNNEDVNTNGYH 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00113 465 Pfam Transferase family 18 442 - -
Aip06g00113 465 Gene3D - 15 218 IPR023213 -
Aip06g00113 465 Gene3D - 219 443 IPR023213 -
Aip06g00113 465 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 443 - -
Aip06g00113 465 PANTHER BNAC03G58010D PROTEIN 14 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00113 Aip-Chr6 1068619 1071260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00113 14 405 Monolignol Biosynthesis Gene Families AT5G48930 29.736 5.15e-46 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00113 - - aip:107645267 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00113 06 1068619 1071260 Aip06g00113 06 1068619 1071260 ECH