Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00111 ATGGCCTCATTGAGTGAAAACTCGTCTACATCTACCAAATTTTGCGGCTCTGAAGAAGATTTGCAGCTTCTGATGGATCAGAGGAAGAGGAAGAGAAAGCAGTCGAACCGCGAATCGGCGAGGAGATCTAGAATGAGGAAGCAAAAGCACTTGGATGACCTAGTTGCTGAAGTTGAGAAGCTTAAAAAGGAGAACAATGAAATCCTTAGCGGAGTTAAGATCACAACAGAAAAGTTTCTGAATATTGAGGGAGAAAATTCCATCTTAAGGCATCACTTGAATTCTCTGCTCAGAGGAGAAGGTAGAATAACTATTTCTCAATCAAAACTGGGGCAGCTCCTGAATTTTCTATTGCAATTTTCTGGAGTGGAGAACGAGAATCCCACCTGTCAGAACTCTCACTTGACTAGCAGAAATGTGAGCATGGAATTTAAAGGTCCATTAAGTTCTGAAAGAGGTCATTTATCAGATGGAGGAAGCACCCTGGAGAATTCTGCAACTCCAATATCTCAGAAGTCCCCTTTTGATGACACATTTGTTCCAAATCTGATGGCTACTCCATCTGATCTGTCCATATCAAGCAAATTTTCTATGATGAATTCTGTAGACTCTTCAATTCCGAATCATTCATTTCCAATTCCTCCGGTTTTCTCAGTGCCTGCACTAGATCATCATTCTAATTCTACACCATCAAGACGGGCACATCGATCTCCAGGTCATCCACTATTAAGACAGATTTCAGATAGTCAGATCTTGGGTCTGAAATCACCGGGCTACTCGATTTCTGAGGGAAGGCCATCATTTGTATTCTCCCCCTGTAGCAATGAAATGGCAACAGGATCCCTATATGGATCATCCGATGGCTGGTCCATGCGCACCTTTTCAGAGATGGTGGTTTCTTCNNNNNNNNNNNNNNNNNNNNNNNNGTGA 930 0.4151 MASLSENSSTSTKFCGSEEDLQLLMDQRKRKRKQSNRESARRSRMRKQKHLDDLVAEVEKLKKENNEILSGVKITTEKFLNIEGENSILRHHLNSLLRGEGRITISQSKLGQLLNFLLQFSGVENENPTCQNSHLTSRNVSMEFKGPLSSERGHLSDGGSTLENSATPISQKSPFDDTFVPNLMATPSDLSISSKFSMMNSVDSSIPNHSFPIPPVFSVPALDHHSNSTPSRRAHRSPGHPLLRQISDSQILGLKSPGYSISEGRPSFVFSPCSNEMATGSLYGSSDGWSMRTFSEMVVSXXXXXXXXX 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00111 309 MobiDBLite consensus disorder prediction 222 246 - -
Aip06g00111 309 MobiDBLite consensus disorder prediction 145 174 - -
Aip06g00111 309 Coils Coil 44 71 - -
Aip06g00111 309 Gene3D - 26 78 - -
Aip06g00111 309 MobiDBLite consensus disorder prediction 154 174 - -
Aip06g00111 309 CDD bZIP_plant_GBF1 29 79 IPR045314 GO:0003700|GO:0006355
Aip06g00111 309 MobiDBLite consensus disorder prediction 1 50 - -
Aip06g00111 309 Pfam bZIP transcription factor 28 73 IPR004827 GO:0003700|GO:0006355
Aip06g00111 309 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 26 89 IPR004827 GO:0003700|GO:0006355
Aip06g00111 309 SMART brlzneu 24 88 IPR004827 GO:0003700|GO:0006355
Aip06g00111 309 SUPERFAMILY Leucine zipper domain 28 80 IPR046347 GO:0003700|GO:0006355
Aip06g00111 309 PANTHER EXPRESSED PROTEIN 124 301 - -
Aip06g00111 309 MobiDBLite consensus disorder prediction 1 17 - -
Aip06g00111 309 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 31 46 IPR004827 GO:0003700|GO:0006355
Aip06g00111 309 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 124 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00111 Aip-Chr6 1023206 1035090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00111 8 90 bZIP Transcription Factor Family AT1G75390 62.353 5.91e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip06g00111 bZIP_1 2.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00111 - - gmx:100800918 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00111 06 1023206 1035090 Aip07g02537 07 105396849 105398333 ECH
Aip06g00111 06 1023206 1035090 Aip06g00111 06 1023206 1035090 ECH