Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00076 ATGCCGTCCTCATGCCCTCCTGGATGCCAAATCTCACGGGGTATCAAACATATGCATCATCCACAGCAACAAGTACACCACATGCCTAATAATATGGGTGACGGTTCTTACACTGCAAGGGAAATGCACACAAGTGATTCCCTCCCAACTGTGCCCATTCCTTCAGAGGCTGGGAAGTCCCGGCGAGGTAAACGACCAAAGGAGCCTAAGTCAGTTTCACCAAATAAGAAGGCTTCAAAAGGTACTAGAAAGGTGAAGAGGGATGACGAAGATACTCACAAGATGATGTTTGGCAAGGCTAATGAATGGAAGAGTAGTCAGGAAATGATTAATGGGAGCGAAGACCTTAACAAGCAGTTAGAGGTGACAAAGGCCGATTGGAAATCCCAGGACTTGGCATTGAACCAAGTTGCGTACGATGAGTCGACAATGCCAGCTCCCGGGTGTTCTTGTACTGGTGTTCTGAGGCAGTGTTACAAATGGGGAAATGGAGGTTGGCAATCTGCTTGTTGCACAACCACCCTTTCAGTGTATCCCCTTCCAGCAGTTCCTAACAAGAGGCATGCTCGGATAGGTGGCCGGAAAATGAGTGGAAGTGCTTTCAATAAGCTGCTTAGTCGGCTTGCTACTGAGGGTCATGATCTGTCAAACCCAGTTGACCTCAAGGACCATTGGGCCAAACATGGTACAAATCGGTATATCACGATAAAGTAG 714 0.4776 MPSSCPPGCQISRGIKHMHHPQQQVHHMPNNMGDGSYTAREMHTSDSLPTVPIPSEAGKSRRGKRPKEPKSVSPNKKASKGTRKVKRDDEDTHKMMFGKANEWKSSQEMINGSEDLNKQLEVTKADWKSQDLALNQVAYDESTMPAPGCSCTGVLRQCYKWGNGGWQSACCTTTLSVYPLPAVPNKRHARIGGRKMSGSAFNKLLSRLATEGHDLSNPVDLKDHWAKHGTNRYITIK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00076 237 MobiDBLite consensus disorder prediction 58 74 - -
Aip06g00076 237 MobiDBLite consensus disorder prediction 24 51 - -
Aip06g00076 237 PANTHER PROTEIN BASIC PENTACYSTEINE6 3 107 - -
Aip06g00076 237 PANTHER - 110 237 IPR010409 -
Aip06g00076 237 Pfam GAGA binding protein-like family 16 237 IPR010409 -
Aip06g00076 237 SMART GAGA_bind_2 1 237 IPR010409 -
Aip06g00076 237 PANTHER PROTEIN BASIC PENTACYSTEINE6 110 237 - -
Aip06g00076 237 PANTHER - 3 107 IPR010409 -
Aip06g00076 237 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00076 Aip-Chr6 750116 750829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00076 3 237 BBR or BPC Transcription factor family AT5G42520 61.538 1.78e-93 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Aip06g00076 GAGA_bind 4.8e-86 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00076 - - gmx:100783502 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00076 06 750116 750829 Aip06g00076 06 750116 750829 ECH