Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00035 ATGGCTGAGACCACACCCAATCACACACAAACAGTTTCTGGATGGGCTGCTCATGATTCTTCTGGCAACATAACCCCCTACACTTTCAAAAGAAGAGAGAACGGTGTTAATGACGTGAGCATAGAGATCTTGTACTGCGGGATTTGCCACACGGACATTCACTACGTGAAAAATGAATGGGGAATCACAAGGTACCCGGTTGTTCCGGGGCACGAGATCGTTGGGGTGGTAAGCAAGGTGGGGAGGGAAGTGAAGGGATTCAAAGAAGGAGACAGAGTAGGAGTGGGGTGTTTGGCAGCAACATGCTTGGAATGTGAGTATTGCAAGTCCGATCAGGAGAACTACTGCGACAAACTTGAGTTCACTTACAATGGAGTTTTCTGGGATGGTAGCATCACTTATGGTGGCTACTCAAAAATGCTGGTCGCTGATTACAGATACGTGGTACATGTGCCGGAGAATCTGCCAATGGACGCAACGGCACCACTGCTGTGTGCTGGAGTGACGGTGTTCAGTCCCTTGAAAGACCACGGTTTGGTTGAATCGCGAGGGAAAAGCATTGGCATTGTGGGCTTGGGTGGTCTTGGACACGTGGCTGTCAAGTTTGCCAAGGCCTTTGGACACCATGTCACTGTCATAAGCACTTCTCCTTCCAAAGAGGTGGAGGCTAAGGAGCGTTTGGGAGCCGACCATTTCATAGTGAGTTCCAACCCCAAGCAAATGCAGGGTGCCAAGAGAAGCCTTGATTTCATTTTGGACACTGTTTCAGCTGAGCACTCTCTTTTGCCCCTTTTGGAATTGCTCAAAGTTAATGGCACTTTGTTTATTGTGGGTGCACCCGATAAGCCATTCCAATTGCCCGCATTTCCATTGATCTTTGGGAAGAGATCAATCAAAGGTGGGATCATAGGAGGAATAAAAGAAACCCAGGAAATGTTGGACGTTTGTGGGAAGCACAACATCACATGTGACATTGAATTAATCACTCCAGACAGAATCAACGAAGCTCTTCAACGTCTTGCTAACAATGATGTCCGCTACCGTTTCGTCATTGACATCGGTGCTGCCACCTCTAATAACTAA 1083 0.4774 MAETTPNHTQTVSGWAAHDSSGNITPYTFKRRENGVNDVSIEILYCGICHTDIHYVKNEWGITRYPVVPGHEIVGVVSKVGREVKGFKEGDRVGVGCLAATCLECEYCKSDQENYCDKLEFTYNGVFWDGSITYGGYSKMLVADYRYVVHVPENLPMDATAPLLCAGVTVFSPLKDHGLVESRGKSIGIVGLGGLGHVAVKFAKAFGHHVTVISTSPSKEVEAKERLGADHFIVSSNPKQMQGAKRSLDFILDTVSAEHSLLPLLELLKVNGTLFIVGAPDKPFQLPAFPLIFGKRSIKGGIIGGIKETQEMLDVCGKHNITCDIELITPDRINEALQRLANNDVRYRFVIDIGAATSNN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00035 360 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Aip06g00035 360 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED 1 356 - -
Aip06g00035 360 PANTHER ALDEHYDE REDUCTASE 1 356 - -
Aip06g00035 360 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491
Aip06g00035 360 CDD CAD1 14 352 - -
Aip06g00035 360 Gene3D - 15 353 - -
Aip06g00035 360 SUPERFAMILY GroES-like 18 181 IPR011032 -
Aip06g00035 360 Gene3D - 166 323 - -
Aip06g00035 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Aip06g00035 360 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Aip06g00035 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00035 Aip-Chr6 263008 264878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00035 14 354 Monolignol Biosynthesis Gene Families AT2G21730 57.310 3.37e-144 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00035 K00083 - gmx:100820588 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00035 06 263008 264878 Aip06g00035 06 263008 264878 ECH