Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00032 ATGGCAACAGTAATTGCCTTAGTGGTGATGACCATAATGGTGTCCTTCACTTTTGTAGCAAGTGCACTAAGTGTGGATTACTATGAACACACATGTCCTCAGGTAGAGTCCATTGTTTCGGGTGCTGTGTATAAAGCAGCCATGAATGATATAACTGTCCCGGCTGCTCTACTTCGGATGCATTTTCATGATTGCTTCATAAGGGGGTGTGATGGGTCTGTTCTACTGGAATCAAAAGGAAATAATAAAGCAGAAAAGGATGGACCACCCAACATCTCATTGCATGCATTCTATGTCATTGATAACGCCAAGAAAGCAATTGAAGCCGTATGTCCCGGAGTCGTATCTTGTGCTGATATTTTGGCTCTGGCCGCAAGGGATGCTGTTCATCTGTCTGGAGGACCCTATTGGGAAGTGCCTAAAGGAAGAAAAGATGGAAGGATATCAAAGGCCATTGAAACAAGACAGTTGCCAGCTCCAACCTTCAATATATCCCAATTACAACAAAGCTTCTCTCAGAGAGGCCTTTCCTTGGAAGATCTTGTAGCCCTCTCAGGTGGCCACACTCTGGGTTTTGCTCACTGCTCCTCTTTCCAAAACAGGATTCACAACTTCAGCCCCAACAAAGACATTGACCCTTCCTTGAACCCATCATTTGCCACCAACCTCAGAACCATATGTCCCTTTCACAACAAGGCAAACAATGCAGGCGAGTTCATTTGA 723 0.4495 MATVIALVVMTIMVSFTFVASALSVDYYEHTCPQVESIVSGAVYKAAMNDITVPAALLRMHFHDCFIRGCDGSVLLESKGNNKAEKDGPPNISLHAFYVIDNAKKAIEAVCPGVVSCADILALAARDAVHLSGGPYWEVPKGRKDGRISKAIETRQLPAPTFNISQLQQSFSQRGLSLEDLVALSGGHTLGFAHCSSFQNRIHNFSPNKDIDPSLNPSFATNLRTICPFHNKANNAGEFI 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00032 240 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Aip06g00032 240 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00032 240 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00032 240 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00032 240 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00032 240 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00032 240 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00032 240 ProSiteProfiles Plant heme peroxidase family profile. 22 240 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00032 240 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00032 240 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00032 240 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00032 240 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00032 240 Gene3D - 26 157 - -
Aip06g00032 240 CDD secretory_peroxidase 23 236 IPR033905 GO:0004601|GO:0042744
Aip06g00032 240 Pfam Peroxidase 45 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00032 240 PANTHER PEROXIDASE 64 7 238 - -
Aip06g00032 240 Gene3D Peroxidase, domain 2 158 234 - -
Aip06g00032 240 SUPERFAMILY Heme-dependent peroxidases 23 235 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip06g00032 240 PANTHER PEROXIDASE 25-RELATED 7 238 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00032 Aip-Chr6 251546 253316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00032 2 237 Peroxidase AT5G42180 75.000 4.89e-133 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00032 K00430 - nnu:104603652 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00032 06 251546 253316 Aip06g00032 06 251546 253316 ECH