Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00030 ATGGGTAGAGCTATCAACAAAACTGTGACAATTGTGGAGTTGATCAAGAGGAGAATTGTGGGTCTCCACCAGAATACACAAATTGGATCCACTGACATTACTGATACTTGGGAGCCCCTAGAGGAAGGCCTCCTTCCTTTGGAGACAACAAGACATGTATCAATGATAACAATAACCCTTTCTAAGAAGGAAATCAATACATCATCTGTGGGGTATCAGCCTCCATTACCAGCTGACCAGGTGAAGGCATCTGCTGATTTTGATTATGAAGGAGAGAGTTCACCAAATGGCCGAATTCGAGGTCGTGGGGGCCGAGGAAGAGGAAGGGCCAGAGGTAATGGTTTTATTTCAGCTGATTATGAGGATGGAGGCTGGGATCGCAACATGGGAAATCCCAGGGGGGGAAGGGGCAGAGGAAGAGGAAGAGGACGTGGTTTCCGTGGTCGTGGAAGGGGAGGATACAATGGACCTCAGCTTGATATGCAGCAAGATGGTGGATACAACCAAGATGTACCTCCCCAAGGACGTGGTCGTGGCCGTGGCAGGGGTGGTTATCGTGGAAGGGGTCGTGGCTTTAGATCCAATGGGCCAATCCAGGCAGCTGCTTGA 609 0.4992 MGRAINKTVTIVELIKRRIVGLHQNTQIGSTDITDTWEPLEEGLLPLETTRHVSMITITLSKKEINTSSVGYQPPLPADQVKASADFDYEGESSPNGRIRGRGGRGRGRARGNGFISADYEDGGWDRNMGNPRGGRGRGRGRGRGFRGRGRGGYNGPQLDMQQDGGYNQDVPPQGRGRGRGRGGYRGRGRGFRSNGPIQAAA 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00030 202 PANTHER RIBONUCLEASE P SUBUNIT P25 1 199 - -
Aip06g00030 202 Gene3D - 1 66 IPR036882 GO:0003676
Aip06g00030 202 Pfam Alba 1 31 IPR002775 GO:0003676
Aip06g00030 202 PANTHER DNA/RNA-BINDING PROTEIN ALBA-LIKE PROTEIN-RELATED 1 199 - -
Aip06g00030 202 MobiDBLite consensus disorder prediction 88 202 - -
Aip06g00030 202 SUPERFAMILY AlbA-like 1 77 IPR036882 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00030 Aip-Chr6 242884 247222 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00030 - - adu:107493234 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00030 06 242884 247222 Aip06g00030 06 242884 247222 ECH