Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip06g00029 | ATGCTGGACTCAGTTCTGCTGGCGCTGTTCCTGCCGTGCCTGGGCATGAGCGCCGTCTTCATAGTGTACATCTGCCTTCTCTGGTACGCCACCGCACACCATCCCAACCTCCCTCCGCCCCCAGCCAAAACCCTCTCCGTGAAGGGCCTCTCCCCCTCCGACCTTGACAAGCTCCCCAAGGTTACCGGCAAGGACCTGCTGTCCCCTAGCGAATGTGCAGTGTGCCTCGATGACATCGCCCACGAACAAGCTGTTCGGATGGTTCCCGGTTGCAACCATGGCTTTCACCTTGAATGCGCGGATACCTGGCTCTCAGAACACCCTCTGTGTCCGGTTTGTAGAGCCAAACTTGACCTTGAGAATTTGAATTCCTCTGAAAGTGAAAAGAATCCATGCTAA | 399 | 0.5614 | MLDSVLLALFLPCLGMSAVFIVYICLLWYATAHHPNLPPPPAKTLSVKGLSPSDLDKLPKVTGKDLLSPSECAVCLDDIAHEQAVRMVPGCNHGFHLECADTWLSEHPLCPVCRAKLDLENLNSSESEKNPC | 132 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip06g00029 | 132 | Pfam | Ring finger domain | 71 | 114 | IPR001841 | - | |
Aip06g00029 | 132 | ProSiteProfiles | Zinc finger RING-type profile. | 72 | 114 | IPR001841 | - | |
Aip06g00029 | 132 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 41 | 119 | IPR013083 | - | |
Aip06g00029 | 132 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL23 | 1 | 132 | - | - | |
Aip06g00029 | 132 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 1 | 132 | - | - | |
Aip06g00029 | 132 | SMART | ring_2 | 72 | 113 | IPR001841 | - | |
Aip06g00029 | 132 | SUPERFAMILY | RING/U-box | 63 | 119 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip06g00029 | Aip-Chr6 | 229461 | 230326 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip06g00029 | 1 | 132 | C3H Transcription Factor Family | AT5G42200 | 48.905 | 1.43e-40 | 131 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip06g00029 | K19037 | - | gmx:100817919 | 202.601 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip06g00029 | 06 | 229461 | 230326 | Aip06g00029 | 06 | 229461 | 230326 | ECH | |
Aip06g00029 | 06 | 229461 | 230326 | Aip07g02387 | 07 | 100318336 | 100319706 | PCT |