Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00020 ATGGGCTTATTAAACACTGGACATGATCAGACCAATCAACAAAAGGATATCGGTACCGCTTTGAAGAATGGAAAGGAAATACTCTTTCAGGGATTCAACTGGGAGTCGCACAAGTACAATTGGTGGGAGAATCTAGAGAGCAAAGTTGGAGAGATAGCCAAAGCTGGATTCACTTCCGTTTGGTTGCCACCACCAACTCATTCCTTCTCACCTCAAGGCTACACTCCACAGAACCTTTACTCACTCAACACTAATTATGGCTCCGAGCATCACTTGAAAGCTCTGCTTGCTAAGATGAAGCAACACAAACTCAGATCCATGGCTGACATTGTCATCAATCATCGTGTTGGCACCACCCAGGGACGTGGAGGAATCTACAACCGTTTTGATGGAATCCCACTCTCTTGGGATGAACGTGCTGTCACTTCAGATACCGGTGGACTTGGCAACAGAAAGACCGGCGCCATATTCCAGGGGTTCCCCAATATCGATCACACCCAAGACTTTGTGAGAAAGGATATCATAGGTTGGCTAAGATGGCTGCGCCATAACGTAGGCTTTGAGGATTTTCGTTTTGATTTTGCAAAAGGGTTTTCAGCAAAATATGTGAAAGAATATATCGAAGCAACAAAGCCATTGTTCTGTGTAGGGGAGTACTGGGATTCTTGCAACTACAGAGGTTCTTCTTTGGACTATAACCAGGACAGCCATAGGCAGCGAATAATCAATTGGATTGATGGCACTGGACAGCTTTCAGCTGCATTTGACTTCACAACAAAAGGAATTCTCCAGGTTATCACCCCTACACACATGCCCTTTATCTCATGCATGTTGATTTTGATCGGTTGA 849 0.4476 MGLLNTGHDQTNQQKDIGTALKNGKEILFQGFNWESHKYNWWENLESKVGEIAKAGFTSVWLPPPTHSFSPQGYTPQNLYSLNTNYGSEHHLKALLAKMKQHKLRSMADIVINHRVGTTQGRGGIYNRFDGIPLSWDERAVTSDTGGLGNRKTGAIFQGFPNIDHTQDFVRKDIIGWLRWLRHNVGFEDFRFDFAKGFSAKYVKEYIEATKPLFCVGEYWDSCNYRGSSLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQVITPTHMPFISCMLILIG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00020 282 CDD AmyAc_arch_bac_plant_AmyA 27 264 - -
Aip06g00020 282 Pfam Alpha amylase, catalytic domain 51 115 IPR006047 GO:0005975
Aip06g00020 282 SUPERFAMILY (Trans)glycosidases 32 264 IPR017853 -
Aip06g00020 282 PANTHER ALPHA-AMYLASE 2-RELATED 22 265 - -
Aip06g00020 282 SMART aamy 26 281 IPR006047 GO:0005975
Aip06g00020 282 PANTHER ALPHA-AMYLASE 22 265 - -
Aip06g00020 282 Gene3D Glycosidases 25 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00020 Aip-Chr6 185449 188840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00020 1 264 Glycoside Hydrolase AT1G76130 71.970 3.72e-145 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00020 K01176 - gmx:100813490 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00020 06 185449 188840 Aip06g00020 06 185449 188840 ECH