Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00019 ATGGGATCGCTCCCGCTCCCACTCAACCAATATCCATATCCCAATGCTCGCAGGGACAACTCAGTCGTTGACCATTTTCACGGCATTACCATTCCTGACCCTTACAGATGGCTTGAGGATCCTGATGCCCAAGAAGTCAAAGACTTCGTGCACAGCCAGCTTCAGCTAACGGATTCTGTACTGGAGAGCTGCGCTGCACGTCCCAACCTCCGCCACAAACTCACCAACCTCTTCGACCATCCTCACTACACTGTACCTTTCAGGCGATCGCACAACACCTATTTCTACTTCCACAACTCTGGCCTTCAGCCACACAGTGTTCTCTACATGCAGAATGGCTTCCACGCCGGGGCTCAACCGCACCTTCTGCTTGACCCCAATGCACTCAGCCCAGATGGATCCGTCTCCCTCACTGCTGTATCCGTAAGCCAACATGCTGACTTCTTGGCTTATGGCCTTAGTTCTAGCGGCACCGATTGGGTCACTATCAACATAATGCGTATCCAAGACAAGCATCTCCTCCCACATACTTTATCCTGGGTGAAATTTTCTTCTATTAGTTGGACGCATGACACCAAAGGTTTCTTCTATAGCCGCTATCCAGCTCCCAAGGAGGGACAACTGGTAGATGCTGGCACTGAGACAAACACTAACCTTTATCATGAACTCTATTATCATTTTCTGGGTACTGATCAGTCCCAAGATATTTTGTGCTGGAGAGATCCCCAGAACCCTGAATATCGGTTTAGAGCAAGTGTTAGTGATGATGGCAGGTATATTATCATGTATATTGAACAAGGTTGCGATCCAGTGAATAAACTTTACTACTGTGACATGTCCGAACTTACGAATGGGCTGCAAGGTTTTGGGAATAAACAGGAAGAAGAAGATGCTCATGCTCATGCTACTATGCTCCCATTTGTAAAGCTTGTTGACACGTTTGATGCACAGTTTCACTACATTGCAAATGATGACACTTTATTCACATTCTTAACAAACAAAAATGCTCCCAAATATAAACTAGTCCGAGTGGATTTGAAAGAACCTATTAATTCTTGGTTCGATGTTATCCACGAGTCAGAGAGGGATGTTCTTGAATCAGCATGCGCTGTGAACGGCAACCAAGTAATCGTAAGCTACTTGAGTGATGTCAAGTACGTTGTGCAAGTAAGAGACTTGGAAACAGGTTGCTTGCAGCATCATTTACCAATTGACATTGGCACCGTTAATGGAATCTCTACACGCCGTCAAGACAGTGTCTTTTTCTTTGGCTTCTCCAGCTTTCTGAGTCCTGGTATCGTATATCAGTGCGACCTGGGAACACAAGCTCCTGTTATCAAGGTATTCCGCGAGATTGTAGTTCCTGGTTTTGATCGCTCTCAGTTTCATGCCAATCAGGTGTTTGTTGCTAGTAAAGATGGTACCAAGATTCCAATGTTCATTGTTGCAAGAAAGGACATTAGTTTGGATGGTTCACACCCCTGTTTGCTATACGGGTATGGTGGTTTTAACGTGAGTGTCACACCGTGTTTCAGTGTGAGCCGCATTGTGCTTGCAAGACACTTGGGTTGTGTTTTGTGCATAGCGAACATTCGAGGTGGTGGGGAGTATGGGGAGGAATGGCACAAAGCAGGATCCCTTGCAAAGAAGCAGAATTGTTTCGATGACTTCATCTCTGCAGCCGAATACCTTGTATCCGTAGGGTATACCCAGCCCGCAAAGTTGTGTATTGAAGGCGGAAGCAACGGCGGACTTCTTGTTGCTGCTTGCATAAATCAGAGACCTGATCTTTTTGGTTGTGCACTGGCTCATGTTGGTGTTATGGACATGCTACGATTCCACAAGTTCACCATAGGTCATGCTTGGACTTCAGAGTTTGGTTGTTCAGAAAAGGAGGAGGAGTTTCATTGGCTAATCAAATACTCACCGTTGCACAATGTACGAAGACCCTGGGAAGAGTTTGGTGGTGGGTCAATCCAGTACCCATCAACGATGTTATTGACGGCTGATCATGATGATCGCGTTGTGCCACTCCACTCATTGAAGTTATTGGCGACGATGCAGTATGTTCTGAGTACTAGTATGAAGCAAAGTCCTCAAACAAACCCTGTGATTGCTCGCATCGAATGCAAGGCCGGACATGGAGCTGGGCGTTCCATGCAGAAAATAATTGAGGAAGCTGTTGACAGGTACGGATTTATGGCTAAAGTGTTAGAAGCCCACTGGATTGAATAG 2235 0.4609 MGSLPLPLNQYPYPNARRDNSVVDHFHGITIPDPYRWLEDPDAQEVKDFVHSQLQLTDSVLESCAARPNLRHKLTNLFDHPHYTVPFRRSHNTYFYFHNSGLQPHSVLYMQNGFHAGAQPHLLLDPNALSPDGSVSLTAVSVSQHADFLAYGLSSSGTDWVTINIMRIQDKHLLPHTLSWVKFSSISWTHDTKGFFYSRYPAPKEGQLVDAGTETNTNLYHELYYHFLGTDQSQDILCWRDPQNPEYRFRASVSDDGRYIIMYIEQGCDPVNKLYYCDMSELTNGLQGFGNKQEEEDAHAHATMLPFVKLVDTFDAQFHYIANDDTLFTFLTNKNAPKYKLVRVDLKEPINSWFDVIHESERDVLESACAVNGNQVIVSYLSDVKYVVQVRDLETGCLQHHLPIDIGTVNGISTRRQDSVFFFGFSSFLSPGIVYQCDLGTQAPVIKVFREIVVPGFDRSQFHANQVFVASKDGTKIPMFIVARKDISLDGSHPCLLYGYGGFNVSVTPCFSVSRIVLARHLGCVLCIANIRGGGEYGEEWHKAGSLAKKQNCFDDFISAAEYLVSVGYTQPAKLCIEGGSNGGLLVAACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSEFGCSEKEEEFHWLIKYSPLHNVRRPWEEFGGGSIQYPSTMLLTADHDDRVVPLHSLKLLATMQYVLSTSMKQSPQTNPVIARIECKAGHGAGRSMQKIIEEAVDRYGFMAKVLEAHWIE 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00019 744 PANTHER PROLYL OLIGOPEPTIDASE-LIKE PROTEIN 1 744 - -
Aip06g00019 744 ProSitePatterns Prolyl endopeptidase family serine active site. 556 586 IPR002471 GO:0004252|GO:0006508
Aip06g00019 744 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 494 512 IPR002470 GO:0004252|GO:0006508
Aip06g00019 744 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 521 545 IPR002470 GO:0004252|GO:0006508
Aip06g00019 744 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 549 568 IPR002470 GO:0004252|GO:0006508
Aip06g00019 744 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 579 599 IPR002470 GO:0004252|GO:0006508
Aip06g00019 744 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 661 683 IPR002470 GO:0004252|GO:0006508
Aip06g00019 744 Gene3D alpha/beta hydrolase 22 734 IPR029058 -
Aip06g00019 744 SUPERFAMILY Peptidase/esterase 'gauge' domain 10 445 - -
Aip06g00019 744 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 14 444 IPR023302 GO:0004252
Aip06g00019 744 Pfam Prolyl oligopeptidase family 511 739 IPR001375 GO:0006508|GO:0008236
Aip06g00019 744 Gene3D - 81 453 - -
Aip06g00019 744 SUPERFAMILY alpha/beta-Hydrolases 466 689 IPR029058 -
Aip06g00019 744 PANTHER PROLYL ENDOPEPTIDASE 1 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00019 Aip-Chr6 171886 174791 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00019 K01322 - gmx:100812955 1193.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00019 06 171886 174791 Aip06g00019 06 171886 174791 ECH
Aip06g00019 06 171886 174791 Aip07g02363 07 98271834 98276954 PCT