Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00015 ATGGGCCGAAGACCCTCATTTTCTTGGGTTTCTGCTACTGCTCCAAAACAAACAAACGCACAAAGATCATCGCCTTCATCTCCGGTTACGAATTTTTTGGTCCGTGAAATTGTTGCTGAGAAAATAGCATGGCAAGTCAGGGCTCTAATGAAGGCTCTAGTTCCGGCATTACATCGGCTGAGTATGCCTGTTTCGTTGTTAAAGGAGAAAATTGCAAATGAAATTGGTCTTCCAGTTGGTCAGCAACGGCTGATTTTTAGAGGAAAAGTCTTAAAGGACGAGCATGTGCTATCTGAGTATCATATCGAGAATGGGCATACCTTGCATCTAGTTGAAAGGCAACCAAATCAGTCACAGGCTTCTGGTAATAGTACTGCTGAGCCAGCTGGTGCTAATGGTAATGCAGGAAATGATGCAGCCTCCGTGCCTCCTCGTAACCGTGTTGGACAAATTTCACACAGTGTTGTTCTTGGAACTTTTAATGTGGGGGACCAAGGGGAAGGCATTGTTCCTGACCTTACACGGGTTATTGGGGCAGTTTTGAATTCTATTGGAATTGGTGGTCAGAACACAAGTAGTCCTCCCAATGCTACCCAACCTGCTACAGCTCCGCTAGGGAATGAAGCTGCGGGCGTGAATTCTGGGAATCAAAATGCATCTGGAAATCAAGCACAGTCTGGCCAGACATTTCCTGGTCAGGCATTCCAATCTCTGCCTCATGTTGTTCAAATTCCTGTGGCTTCTGGGGCCATACCAATCCCTTCTCTCAATGCTCCAATTCCTGATTCATTGAACACACTCTCTGAATTTATAAATCGCATGGAACAGACACTATTGCTAAATGGTTATCAGTCAAATTTATCTTCAACTAATGCTGGAGATCAACGGGTTGAATTGCCTACCAATGCACAAGGGTTGCCGACAGTTGAAGCATTAAGCACCATCTTGCATCGTACAGAACAGTTGCTTAGTCATCAAGCTGTTGCTGCGATATCTCATATTGCTGGACGGTTGGAGCGAGAGGGAACTTCGTCTGATTTAAGTATAAGGGATCAAATACAGTCAGAGTCAGCACAATTAGGACTTGCTATGCAGCATTTGGGCACACTTTTACTTGAGCTTGGCCGAACAATCTTAACCCTGCGCATGGGACAGTCTCCTGCAGAATCTGCTGTAAATGCTGGACCTGCAGTTTATATTTCTCCATCAGGGCCAAATCCTGTAATGGTTCAGCCCTTTCCTCTTCAGACAAACTCACTATTTGGTGGTCCTATTCCTTCTTCAACTCCTCCAGCATTTGGTGCCATTGGTATTGGAAGTGCTCCGCGGAATGTGAACATTCATATACATGCTGGTACTGCTCTTGCTCCCATTGTTTCAGCAATTAGTTCTAGGACAAATAATGGAGAAGGGACAAGAAATGAAAACCGTAATGAGCCTGGCCCTGGGGATTCAGGTTCTGCACGTGCGTTGCCCGTTAGAAATTTCATGTCGGCAGCCTTCCCATCTCACCCTCCTGGTGTTGGAGTTGCCAGTGGCACACAGACTGGGTTAGGTGTTTCTACTTCACAGCCACCACCTAATTCAACTCCATGGTCATCTGCTGCAAATGAAGCGAATTTCTTTAGGAACTTAGTTCGTAATATACAAGGAGATAACACAGCTCCATCAGGTCAGATGGCATCAACTGGCCGAGACTTGTCTTCTGGTTCTGAATCAAGGTCTTCCCAGAGAGATGAGCAGGCAGATACCACCGGGATGAATGGCTTCAGAACTGCAACTGCATCCTCAGTTGGCTGTGGCTCTGTAAGTGGAGCTGTACTCCAAACTGAGGCAGTGCAAACCTGTGATAATGATGAGAGAGTTGTTTCAGTTGACAATTACCCTTCAAGTTCTTCCGGTCAAGGTTTACAAAGCTCTTCTGGTGGAGAAACAACAGTGAAATCAGAACAAGTAAAGGATGCTCCATCTGCAAGTGCGAAACAGGGTGTAGCTGAACCTGCCAGAGCTGCTCCTCTTGGATTGGGCATGGGTGGCTTGGAGCGTAAGAGGCGGACGCGACTTCAACCTCCTGTAAGTAAAGGCGCTGATGTATCATCCGGTTCTTCTGTCAACCAAAGTCACCAAACTGGAACAGAGGGTCAACACACATTACAAGCTCTTCCAAGTCATGGCTCTTCTGTGAATGCAAGAAATCCTAATAGACCATCCCAGCAGCCGCTACCCTCTAGTAATAGGCAGATTGATATGGCTGGTTTGATGTCTCAGGTTTTGCATAGCCCTGCTTTGAATGGTTTGCTTGAAGGGGTTTCACAGCAAACTGGGGTTGACTCACCTAATGGCTTGAGGAATATGTTGCAGCAGTTCACGCAGAGCCCACAGATGATGAACACAGTCAATCAAATTGTCCAACAGGTTGGCAGTCAGGATATGGGAAATATGTTTGCCGGGATGGAAAGGGGGCAAGGGGGTGGCATTGATTTTTCAACGATTCTTCAACAGCTGATGCCTATTGTATCCCGAGCGCCTGGTGGGGATACTCCTCCTCCACTATTCTCTGCTGTAGAACCTGAAAACTCCGATAATACAACTTTACAGCTCAACCTTCAAGAAGTGGTGGATAGGATTGATCACTTGAGCCCACCAACAGATGTTTTCCGTGCTGTAGCTGAAAATGCCGTCCTGGTATCTGGGGGTGTAAATGTTACCGATGATATTCTGGATGAGTTATGCAGTAATGAGAGTCTTGCCAGCGAATATTTGGAGACGTTGCGATATGATGTGAGACAGCGGCTAAATGGACATTCTGAGCAGGACAAGTCAGGAGCTGAAGTACTAAGTAATAACACCGCCACCGTAAGTAGCATATACATAGCACGTAACTGGCGTGTTAACTCTCGAGAATCACCTAGAATGATTTTGCAACTCCATAGTCTATACCCTCGACTTGAGATGTAA 2958 0.4618 MGRRPSFSWVSATAPKQTNAQRSSPSSPVTNFLVREIVAEKIAWQVRALMKALVPALHRLSMPVSLLKEKIANEIGLPVGQQRLIFRGKVLKDEHVLSEYHIENGHTLHLVERQPNQSQASGNSTAEPAGANGNAGNDAASVPPRNRVGQISHSVVLGTFNVGDQGEGIVPDLTRVIGAVLNSIGIGGQNTSSPPNATQPATAPLGNEAAGVNSGNQNASGNQAQSGQTFPGQAFQSLPHVVQIPVASGAIPIPSLNAPIPDSLNTLSEFINRMEQTLLLNGYQSNLSSTNAGDQRVELPTNAQGLPTVEALSTILHRTEQLLSHQAVAAISHIAGRLEREGTSSDLSIRDQIQSESAQLGLAMQHLGTLLLELGRTILTLRMGQSPAESAVNAGPAVYISPSGPNPVMVQPFPLQTNSLFGGPIPSSTPPAFGAIGIGSAPRNVNIHIHAGTALAPIVSAISSRTNNGEGTRNENRNEPGPGDSGSARALPVRNFMSAAFPSHPPGVGVASGTQTGLGVSTSQPPPNSTPWSSAANEANFFRNLVRNIQGDNTAPSGQMASTGRDLSSGSESRSSQRDEQADTTGMNGFRTATASSVGCGSVSGAVLQTEAVQTCDNDERVVSVDNYPSSSSGQGLQSSSGGETTVKSEQVKDAPSASAKQGVAEPARAAPLGLGMGGLERKRRTRLQPPVSKGADVSSGSSVNQSHQTGTEGQHTLQALPSHGSSVNARNPNRPSQQPLPSSNRQIDMAGLMSQVLHSPALNGLLEGVSQQTGVDSPNGLRNMLQQFTQSPQMMNTVNQIVQQVGSQDMGNMFAGMERGQGGGIDFSTILQQLMPIVSRAPGGDTPPPLFSAVEPENSDNTTLQLNLQEVVDRIDHLSPPTDVFRAVAENAVLVSGGVNVTDDILDELCSNESLASEYLETLRYDVRQRLNGHSEQDKSGAEVLSNNTATVSSIYIARNWRVNSRESPRMILQLHSLYPRLEM 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00015 985 MobiDBLite consensus disorder prediction 620 745 - -
Aip06g00015 985 MobiDBLite consensus disorder prediction 550 590 - -
Aip06g00015 985 MobiDBLite consensus disorder prediction 114 131 - -
Aip06g00015 985 PANTHER OS07G0498800 PROTEIN 62 939 - -
Aip06g00015 985 MobiDBLite consensus disorder prediction 620 656 - -
Aip06g00015 985 MobiDBLite consensus disorder prediction 514 535 - -
Aip06g00015 985 PRINTS Ubiquitin signature 73 93 IPR019956 -
Aip06g00015 985 PRINTS Ubiquitin signature 94 115 IPR019956 -
Aip06g00015 985 MobiDBLite consensus disorder prediction 114 146 - -
Aip06g00015 985 MobiDBLite consensus disorder prediction 187 231 - -
Aip06g00015 985 MobiDBLite consensus disorder prediction 465 535 - -
Aip06g00015 985 SUPERFAMILY Ubiquitin-like 59 115 IPR029071 -
Aip06g00015 985 MobiDBLite consensus disorder prediction 465 481 - -
Aip06g00015 985 MobiDBLite consensus disorder prediction 10 26 - -
Aip06g00015 985 Pfam Ubiquitin family 64 114 IPR000626 GO:0005515
Aip06g00015 985 ProSiteProfiles Ubiquitin domain profile. 59 117 IPR000626 GO:0005515
Aip06g00015 985 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 62 939 - -
Aip06g00015 985 MobiDBLite consensus disorder prediction 1 26 - -
Aip06g00015 985 SMART ubq_7 44 113 IPR000626 GO:0005515
Aip06g00015 985 Gene3D - 46 135 - -
Aip06g00015 985 MobiDBLite consensus disorder prediction 693 745 - -
Aip06g00015 985 MobiDBLite consensus disorder prediction 550 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00015 Aip-Chr6 142941 150550 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00015 67 113 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 51.064 1.03e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00015 - - gmx:100783611 1195.26