Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00010 ATGTTAATTAAGAATGCAAATGGAACCGTCATTGCCGTCAAAAAATTGAACTCCGAAAGCTTACAGGGGCTTGAGGAGTGGAAGTCAGAAGTAAATTTTCTGGGACGCCTCTCTCATCCTAACCTTGTTAAGTTGTTGGGATACTGCTTGGAGGAAGCAGAACTTCTTCTCATCTATGAATTTATGCAGAAGGGCAGTTTGGAAAACCACCTATTCGGAAGGGGCTCTGCTGTTCAACCACTTCCATGGGATATTAGGCTTAAGATTGCAATCGGAGCAGCTCGTGGCCTTGCCTTCTTGCATACATCCGAGAAAGTAATTTACAGAGACTTCAAGGCCTCCAATATATTGCTCGATGGGGCCTATAATGCAAAGATATCAGACTTTGGCTTGGCAAAACTGGGTCCTTCAGCTAGTCGCTCCCATGTGACAACTAGGGTGATGGGCACATATGGTTATGCAGCTCCTGAATATGTTGCTACAGGGCATCTGTATGTGAAGAGTGACGTGTATGCATTTGGAGTAGTTTTGGTGGAGATGCTAACAGGGCTACGAGCACTTGACCCAAACCGCCCAAGTGGGCAACATAATCTAACAGATTGGATCAAACCATACCTGCATGATAGAAGAAAGCTGAAAAGCATTATGGATTTTCGGTTGGAAGGAAAATATCCGTCCAAAGCTGCATTTCGTATAGCTCAGCTTGCGCTGAGATGTCTTGAAACTGAGCCCAAACAGCGGCCGTCAATGAAGGAAGTTTTGGAGAGCTTGGAGCGATTTCATGCTGCCAATGAGAAGGAGGCCactcagataaacatgcctaaaacgtatccgtga 837 0.4373 MLIKNANGTVIAVKKLNSESLQGLEEWKSEVNFLGRLSHPNLVKLLGYCLEEAELLLIYEFMQKGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGAYNAKISDFGLAKLGPSASRSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYAFGVVLVEMLTGLRALDPNRPSGQHNLTDWIKPYLHDRRKLKSIMDFRLEGKYPSKAAFRIAQLALRCLETEPKQRPSMKEVLESLERFHAANEKEATQINMPKTYP 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00010 278 Gene3D Transferase(Phosphotransferase) domain 1 63 276 - -
Aip06g00010 278 Gene3D Phosphorylase Kinase; domain 1 3 62 - -
Aip06g00010 278 CDD STKc_IRAK 7 260 - -
Aip06g00010 278 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 4 267 - -
Aip06g00010 278 Pfam Protein kinase domain 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00010 278 PANTHER OS01G0588500 PROTEIN-RELATED 4 267 - -
Aip06g00010 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 106 118 IPR008271 GO:0004672|GO:0006468
Aip06g00010 278 PIRSF ILK 4 273 - -
Aip06g00010 278 ProSiteProfiles Protein kinase domain profile. 1 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00010 278 SUPERFAMILY Protein kinase-like (PK-like) 5 257 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00010 Aip-Chr6 91929 93724 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00010 6 272 Receptor kinase-like Gene Family AT4G02010 50.185 1.33e-87 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip06g00010 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00010 - - aip:107646235 533.487