Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g04048 ATGGCAGAAGAAGCAAGTCCAGTACGATTTGGAATCGTTGGTTGCGCTGACGTGGCTAGGAAGGTCTCCAGAGCCATAACTCTCGCTCCCAACGCCACCATCGTCGCCGTCGCAAGCCGTTCCCTCGATAAAGCCACCAAGTTTGCAGCCTCCAATGGCCTCCCACCCAATGCTAAGGTTTATGGTTCATACGAAGGGGTTGTAGAAGACCCTGAAGTTGATGCGGTTTACATGCCACTTCCAACAAGCTTACATGTGAAGTGGGCGGTGCTTGCTGCTCAGAGGAAGAAGCACATCCTGCTTGAGACTCCGGTGGCTCTCAGCGTTTCCGATCTCGATAAGATCTTGGAGGCTTGTAGATCCAACGGTGTGCAGTTCATGGATGATACCATGTGGCTGCACCACCCTAGGACCACCAAAATGTTTCACTTCATCTCAGATCCAAATCACTTTGGTCGCCTTCAATCGGTCCACTCCACCTTTTCTTATGGAGTTACTCCTTACTTTCTAGAGAATGACATTCGAGTGAAGCCAGATCTTGATGCTCTAGGTGCACTTGGTGACATTGGGTTCTATTGTATAGGCACAATTCTCTGGGCTTCAAACTATGAGTTACCTAAAACAGCAAGAGCATTGCACAAACCCACATACAATGATGCTGGTGTCATTCTAGCTTGTGCTGCTTCTCTATCCTGGGAAGATGACAAAGTAGCAACCTTCTATTGTTCATTTCTCTCGGACATGTCAATGGACATAGTTGCAATGGGGACAAAAGGGTCATTGCGTGTTCATGATTATGCCATTCCTAACCAAGAGAAAGAGGCCAAGTTTTCAACAAGCTCAAACTCTGATTGGGTTGAGCTTTCGATTGGCTGGGCTCCAAATCCAAGTGAACATGTAGTTCACACTGATCTCCCTCAAGAGGCACTTTTGATTAGTGAATTTGCACGTTTGGTTGGGGCAATTAAGTACAATAACTCAAAACCGGAGGATACGTGGCCCACTATTAGCAGGAAAACACAACTGGTTGTGGATGCTGTGAAGGCTTCAATTGATAATGGTCTTGAGCCTGTTCAAATTCAGGATTAA 1089 0.4665 MAEEASPVRFGIVGCADVARKVSRAITLAPNATIVAVASRSLDKATKFAASNGLPPNAKVYGSYEGVVEDPEVDAVYMPLPTSLHVKWAVLAAQRKKHILLETPVALSVSDLDKILEACRSNGVQFMDDTMWLHHPRTTKMFHFISDPNHFGRLQSVHSTFSYGVTPYFLENDIRVKPDLDALGALGDIGFYCIGTILWASNYELPKTARALHKPTYNDAGVILACAASLSWEDDKVATFYCSFLSDMSMDIVAMGTKGSLRVHDYAIPNQEKEAKFSTSSNSDWVELSIGWAPNPSEHVVHTDLPQEALLISEFARLVGAIKYNNSKPEDTWPTISRKTQLVVDAVKASIDNGLEPVQIQD 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g04048 362 Pfam Oxidoreductase family, NAD-binding Rossmann fold 8 127 IPR000683 GO:0000166
Aip05g04048 362 PANTHER - 5 360 - -
Aip05g04048 362 PANTHER - 5 360 - -
Aip05g04048 362 Gene3D - 3 134 - -
Aip05g04048 362 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 135 319 - -
Aip05g04048 362 Gene3D Dihydrodipicolinate Reductase; domain 2 135 362 - -
Aip05g04048 362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 163 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g04048 Aip-Chr5 148661247 148663615 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g04048 - - tss:122667660 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g04048 05 148661247 148663615 Aip09g02955 09 132193950 132199168 PCT