Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g04041 ATGGATCGTGAGAATCATGGATCTACATCAGAAAATGCAGATTCAATATCCATTGCTCCATTAAGAATTTCACCGAAGTCACCAAGATCAACTTCTAAGTCACCAAAATCTCCAAAGTCTCCAAAGTCTCCAAGGTCTCCTAATTCTCCAAGGTCTCCAAGGGTGCAAATCAAGTCCAGCCTAAGTCCAAAGAACAATAGGCAATCACATTCTCCAAGAGATGGACGTCCCAAGAAAGGTGGTGCTGGAGGAAAAGGTACTTGGGGTGGATTGCTTGATACAGATGACAATGGCACTCTTGATCCCAATGATCCAAACTATGACAGCACTGAGGAATATGAGCGTTCAAATGAAAAGAAAAAGTCAACAACACCACCAGATTTGGTGGATTACAAGAAAAAAGCAACAGTAATTGTGGAAGAATACTTTGCAACTGATGATGTTGTTGCAACAATAGATGAACTCAGAGAACTTGGAAAGCCACAGTATGGCTACTATTTTGTCAAGAAGCTTGTGTCTATGTCAATGGATAGACATGACAAGGAAAAAGAAATGGCAGCTATTCTGTTATCTGCACTCTATGCTGACACATTTCACCCTTCCCAAGTTTACAAAGGCTTCAGCAAATTAGTCGAATCGGCCGATGATTTGATCGTTGATATACCGGACACAGTGGATGTTCTAGCACTTTTTTTAGCCAGAGCAGTTGTTGATGACATTCTCCCCCCTGCATTCTTGAAGAAACAGATGGACTACTTGCCAAAAGATTCGAAAGGGGTCGAGGTCTTGAAGAAAGCGGAGAAGAGCTACCTTGCAGCTCCTCTCCACGCAGAAATAATCGAGCGAAGATGGGGAGGCAGCAAGAATATGACAGTTGATGATGTCAAGTCAAGGATAAACAATTTCTTGAAGGAGTATGTAGTGAGTGGTGACAAGAAAGAAGCCTTCAGATGCATCAAAGATTTGAAAGTTCCATTCTTCCATCATGAAATTGTTAAGAGAGCTCTTATAATGGCTATGGAGAGGCGCCAAGCCGAAGCGCCACTACTAGACCTTCTAAAAGAGGCTGCTGAAGAAGGTTTCATAAACTCTAGCCAAATCTCCAAAGGCTTCAGTAGGCTGATAGATACAGTTGATGATTTATCCCTTGACATACCGAATGCTCGCGAAATTCTGCAGCAATTAATATCTAAAGCAGCATCTGAGGGTTGGTTGTGTGTGTCATCATTGAAATCACTCTCAGTGGAGCCAGAGAGGAACTCAATTACAGATAGTGCTGCTGCTAGAAGCTTCAAGATTAAGTCTCAGAGTATTATTCAGGAGTACTTTTTATCCGGTGACATATTAGAGGTGAATAGTTGCATAGAGCAAGAGAACAAAAACAACAGTGCTGAATTGAATGCAATCTTTGTTAAGAAACTGATAACTCTGGCTATGGACAGAAAGAATAGGGAGAAAGAAATGGCTTCTGTGCTGCTTTCTTCGCTTTGTTTCCCGGCCGATGATGTGGTGAATGGTTTTGTAATGCTGATTGAATCAGCAGATGACACTGCTCTGGACAATCCTGTTGTTGTTGAGGATCTTGCAATGTTTCTAGCAAGAGCAGTTGTGGATGAAGTCCTGGCTCCACAGAATCTTGAGGAGATTGGATCTCAGTGTTTGTCTCCGGATTCCATTGGAAGCAAAGTGCTAAGAATGGCAAAGTCTTCTCTGAAGGCAACTCTCTCAGGGGAGAGAATCTTGAGGTGTTGGGGTGGAGGAGGAAGCAGCAGGACCGGTTGGGCCGTGGAAGATGTTAAGGACAAGATAGGGAAGCTTCTAGAAGAGTATGAATCCGGCGGCGATATAAGAGAAGCTTGTCGCTGTATAAAAGAATTAGGAATGCCATTCTTCCACCATGAAGTTGTTAAGAAATCTTTGGTGACAATCATGGAGAAGAAGAATGAGAGGTTATGGGGACTACTCAAAGAATGCTTTGAATCAGGACTAATAACATTCAACCAAATGATGAAGGGGTTTGGAAGAGTTGCAGAATCTCTTGATGATTTGGCTTTGGATGTTCCTGATGCTAGAACTCAGTTTGCAAAATATGTTGAGAGAGCAAAGAATAAAGGGTGGTTGGACAATTCATTTTGTTTTGGCAAACAAGAACATGAGAATGGCACTTGTTAA 2172 0.4208 MDRENHGSTSENADSISIAPLRISPKSPRSTSKSPKSPKSPKSPRSPNSPRSPRVQIKSSLSPKNNRQSHSPRDGRPKKGGAGGKGTWGGLLDTDDNGTLDPNDPNYDSTEEYERSNEKKKSTTPPDLVDYKKKATVIVEEYFATDDVVATIDELRELGKPQYGYYFVKKLVSMSMDRHDKEKEMAAILLSALYADTFHPSQVYKGFSKLVESADDLIVDIPDTVDVLALFLARAVVDDILPPAFLKKQMDYLPKDSKGVEVLKKAEKSYLAAPLHAEIIERRWGGSKNMTVDDVKSRINNFLKEYVVSGDKKEAFRCIKDLKVPFFHHEIVKRALIMAMERRQAEAPLLDLLKEAAEEGFINSSQISKGFSRLIDTVDDLSLDIPNAREILQQLISKAASEGWLCVSSLKSLSVEPERNSITDSAAARSFKIKSQSIIQEYFLSGDILEVNSCIEQENKNNSAELNAIFVKKLITLAMDRKNREKEMASVLLSSLCFPADDVVNGFVMLIESADDTALDNPVVVEDLAMFLARAVVDEVLAPQNLEEIGSQCLSPDSIGSKVLRMAKSSLKATLSGERILRCWGGGGSSRTGWAVEDVKDKIGKLLEEYESGGDIREACRCIKELGMPFFHHEVVKKSLVTIMEKKNERLWGLLKECFESGLITFNQMMKGFGRVAESLDDLALDVPDARTQFAKYVERAKNKGWLDNSFCFGKQEHENGTC 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g04041 723 SUPERFAMILY ARM repeat 595 713 IPR016024 -
Aip05g04041 723 ProSiteProfiles MI domain profile. 430 551 IPR003891 -
Aip05g04041 723 SUPERFAMILY ARM repeat 290 411 IPR016024 -
Aip05g04041 723 ProSiteProfiles MI domain profile. 130 251 IPR003891 -
Aip05g04041 723 PANTHER MA3 DOMAIN-CONTAINING PROTEIN 53 718 - -
Aip05g04041 723 MobiDBLite consensus disorder prediction 49 68 - -
Aip05g04041 723 MobiDBLite consensus disorder prediction 108 127 - -
Aip05g04041 723 PANTHER PROGRAMMED CELL DEATH 4 53 718 IPR039778 GO:0045892
Aip05g04041 723 Gene3D - 419 574 - -
Aip05g04041 723 Gene3D - 119 271 - -
Aip05g04041 723 SUPERFAMILY ARM repeat 428 589 IPR016024 -
Aip05g04041 723 Gene3D - 582 713 - -
Aip05g04041 723 Gene3D - 281 413 - -
Aip05g04041 723 MobiDBLite consensus disorder prediction 24 39 - -
Aip05g04041 723 MobiDBLite consensus disorder prediction 1 127 - -
Aip05g04041 723 Pfam MA3 domain 600 708 IPR003891 -
Aip05g04041 723 Pfam MA3 domain 132 242 IPR003891 -
Aip05g04041 723 Pfam MA3 domain 432 541 IPR003891 -
Aip05g04041 723 Pfam MA3 domain 296 405 IPR003891 -
Aip05g04041 723 ProSiteProfiles MI domain profile. 294 415 IPR003891 -
Aip05g04041 723 SUPERFAMILY ARM repeat 126 289 IPR016024 -
Aip05g04041 723 SMART ma3_7 599 708 IPR003891 -
Aip05g04041 723 SMART ma3_7 431 542 IPR003891 -
Aip05g04041 723 SMART ma3_7 295 406 IPR003891 -
Aip05g04041 723 SMART ma3_7 131 242 IPR003891 -
Aip05g04041 723 ProSiteProfiles MI domain profile. 598 717 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g04041 Aip-Chr5 148634328 148637480 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g04041 590 698 Eukaryotic Initiation Factors Gene Family AT4G30680 28.571 2.22e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g04041 - - lang:109352315 1124.77