Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03993 ATGGTTAGGGTTATTATTAGTAGTGCAAATAGGCTCTTGATTGTTTTGTTGTTTTCCTTATTACTATTTGTTCCCCAAATCAATGGGTCCATGTCCTCAAACAGGAAATTAGGAAAGGCTCCCATAACTGCAAAGGGACTATCCTATGATTTCTATTGGATATCATGCCCTAGGGTTGAAAGAATTATAAGGAAGCATCTTGAAGATGTCTTTGAAAAGGACCCTGGCCAAGCTCCTGGAATTCTTCGTCTCTTCTTCCATGATTGCTTTTCTCAGGGATGCGATGCGTCTATATTTTTGAGCGGTGCAAGTGGAGAACAGGACACAGATGAAAACTTTGGACTAAGGCCAGAAGCCATTGAGACCATTGAAAATCTTAGAGCTCTTGTTCGCAAACAGTGCCCTAGGGTTGTCTCTTGCTCTGACATCCTTGTTATTGCAGCACGCGAAGCTGTTCGCCAGTTTGGAGGCCCTGATTTTGATGTGCCATTGGGAAGAAAAGACAGCAAATTCTTCAACAAATCCTCAGCCGCAAATCTCCCAAAACCTTTCTTCAAAACCGGAGAGCTTGTTAAATCCTTCAGCGATAGAAACTTGGATGCCACAGATTTGGTTGCACTCTCCGGCGCACACACATACGGGCTAGCCCACTGTGGATCACTCTTCAACCGGACCACCGACACACAGCCGCCGATCGATCCGGAGTTCAGGAATGGCCTCATCGGAAAATGTCCCGACGAGGACAGCCCTGTCCCGATCGACCTAGACATAAGGACACCAAACAAGTTCGACAATATGTATTACATTGATTTGTTGAACCAACAAGGTGTTTTTACCTCGGACCAAGATCTTGCTAGTGATCCTAGGACGAGGGAGATTGTGAACCAGTTTTCTTCTAATCAGAAACTCTTCTTTGACAAGTTTGCTAATGCTTTTGTGAAGGCTTCACAGTTGCAAGTTTTGACTGGGAATGATGTTAATGCTGAGATTCGTAAGACTTGTTTTGCTCCTAATAATGATGGCTTTTCTTCTTCTTCGTCTTCTGTGCTCCATGAGGTTGTGGATTCGGCTGAGACAAACAACATCTAA 1089 0.4417 MVRVIISSANRLLIVLLFSLLLFVPQINGSMSSNRKLGKAPITAKGLSYDFYWISCPRVERIIRKHLEDVFEKDPGQAPGILRLFFHDCFSQGCDASIFLSGASGEQDTDENFGLRPEAIETIENLRALVRKQCPRVVSCSDILVIAAREAVRQFGGPDFDVPLGRKDSKFFNKSSAANLPKPFFKTGELVKSFSDRNLDATDLVALSGAHTYGLAHCGSLFNRTTDTQPPIDPEFRNGLIGKCPDEDSPVPIDLDIRTPNKFDNMYYIDLLNQQGVFTSDQDLASDPRTREIVNQFSSNQKLFFDKFANAFVKASQLQVLTGNDVNAEIRKTCFAPNNDGFSSSSSSVLHEVVDSAETNNI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03993 362 PANTHER PEROXIDASE 25-RELATED 37 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g03993 362 Pfam Peroxidase 64 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g03993 362 Gene3D - 50 334 - -
Aip05g03993 362 ProSiteProfiles Plant heme peroxidase family profile. 46 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g03993 362 PRINTS Haem peroxidase superfamily signature 78 92 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g03993 362 PRINTS Haem peroxidase superfamily signature 138 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g03993 362 PRINTS Haem peroxidase superfamily signature 156 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g03993 362 PRINTS Haem peroxidase superfamily signature 203 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g03993 362 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g03993 362 PANTHER PEROXIDASE FAMILY PROTEIN 37 343 - -
Aip05g03993 362 ProSitePatterns Peroxidases active site signature. 78 89 IPR019794 GO:0004601
Aip05g03993 362 ProSitePatterns Peroxidases proximal heme-ligand signature. 203 213 IPR019793 -
Aip05g03993 362 SUPERFAMILY Heme-dependent peroxidases 46 338 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip05g03993 362 Gene3D Peroxidase, domain 2 182 316 - -
Aip05g03993 362 PRINTS Plant peroxidase signature 56 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g03993 362 PRINTS Plant peroxidase signature 80 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g03993 362 PRINTS Plant peroxidase signature 118 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g03993 362 PRINTS Plant peroxidase signature 137 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g03993 362 PRINTS Plant peroxidase signature 156 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g03993 362 PRINTS Plant peroxidase signature 202 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g03993 362 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g03993 362 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g03993 362 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g03993 362 CDD secretory_peroxidase 46 336 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03993 Aip-Chr5 148203325 148206926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03993 8 357 Peroxidase AT1G71695 48.034 1.58e-107 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03993 K00430 - gmx:100795412 410.223