Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03992 ATGGCTGCTTCAACAATGGCTCTCTCTTCTCCCTCATTGGCTGGCCAAGCAATCAAGCTTTCACCCTCCAACCCAGAGCTTGGTGTTGGAAGAGTCACCATGAGGAAAGCAGCCACCAAGCAAGTTTCCTCTGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCGGGTGAGCCCCCGTCCTACCTCACTGGTGAATTCCCTGGTGACTACGGATGGGACACTGCTGGGCTTTCCGCTGACCCAGAAACATTTGCCAGGAACCGTGAGCTTGAAGTAATCCATAGCAGGTGGGCCATGCTTGGGGCCCTGGGCTGTGTCTTCCCCGAGCTCTTGGCCCGCAACGGTGTCAAATTCGGCGAGGCGGTGTGGTTCAAGGCCGGGTCTCAGATATTTAGCGAGGGTGGGCTTGACTACCTGGGAAACCCAAGTCTGATCCATGCTCAGAGCATTCTTGCCATTTGGGCCACCCAGGTCATCTTGATGGGCGCAGTTGAGGGCTACCGTATTGCTGGTGGGCCTCTTGGTGAAGTGACTGACCCACTATACCCAGGTGGAAGCTTTGACCCATTGGGCCTAGCTGATGATCCAGAGGCCTTTGCGGAGCTGAAGGTAAAGGAGCTCAAGAATGGCAGGCTGGCCATGTTCTCTATGTTTGGGTTCTTTGTTCAGGCTATTGTCACTGGAAAGGGCCCACTAGAGAATCTTGCTGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCCTATGCTACAAACTTTGTACCTGGAAAGTGA 795 0.5459 MAASTMALSSPSLAGQAIKLSPSNPELGVGRVTMRKAATKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03992 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Aip05g03992 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 264 - -
Aip05g03992 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Aip05g03992 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Aip05g03992 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03992 Aip-Chr5 148197811 148198935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03992 1 264 Chloroplast and Mitochondria Gene Families AT2G34430 89.850 4.60e-175 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03992 K08912 - qsu:112030611 524.242