Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03985 ATGGAGATGGAGATGCGAAGCATGGAAGATACAGAGATAGCCACAGACATGACTCCATCCCTCGTCCCTCTCACTTTCTCTCTCCACCACTCCAACCTCCACACTCACTGCTCCTCTTGTTTCTCTCTCCTCCCTCTCTCTCCCATTCCCATCACCCCCTTCCTCTACTGCCCCTCCGTCACTTCCTCTCGTGTCGCTGGCCTCCTCTCCAACCGCCACAAGCTCACGTGCCACAACAACTCCGACGAAGACGAGGTTTCCGAGAGAATCAGCAGTGGAGTCAGAGCCTTGGCCACTGCAATTACGGAGCTGCGAGGGGAGCTGGAGCCGGACGACGCCGTTTTGGAGGAGGCGGAGTGTGCATTGTGCGCGGTGCTAACGAACGCCGTGGAGGTGCAGGATAAGGAAGGGCGCGCACTGGGAATCGCGGTTTATGGTCCGGCGTTCTCTTGGATCAACCACAGCTGCTCCCCCAATGCCTGCTACCGCTTCATCCTCTCTCCTTCTTCTTCTTCTTCTTCGCAGGAATCCAAGCTTCGAATAGCTCCATCTTCCTTTCGCGTGAATTGGGGTTACTTTTCTGCATTAGAAGAAGAGGAGCAAAACCAAGGCTATGGACCGAGATTGATTGTGAGGAGTATCAAGAGAATAAAAAAGGGACAAGAGATTACCATAGCATACACTGATCTCTTGCAATCTAAGGCAATGCGGCAATTGGATCTATGGTCCAAGTACAGGTTTATCTGCTGTTGCATGCGATGTAGTGTTGTGCCCTTCACATATGTTGATCATGCATTGCAAGAAATTTCTGTTTCCGGTTGTGATTTTACTAGTTCAAGCTCCAGCTACAATCTTGTCAGAGACACAGCAGAAAGAAGACTGAATGATTCAGTTGATGATATTATATCTGAGTATCTCATGGCTGGTGATCCTGAGCCTTGCTGTGAGAAACTTGAGAAGATTCTTATGCAGGGTCTGTGCGACGAGTTGGACAATGTTGAAGAAACACCACATTATAAGTTCATGTTGCATCCCCTGCATTACCTCTCTCTAAATGCATACACAACACTGGCTTCGGCATATAAAGTTCGTGCTAGTGATATCTTGTCTACAACTTCTACAATATATCAAAACCAGTTAGAAGCTTTCGACATGAGCAGAACCAGTGCAGCATATTCCTTGTTACTAGCAACTACAGCACATCATCTCTTCAATTCCGAATCCTCACTGATTGCATCTCTTGCAAATTTTTGGACAGGTGCAGGCGAGTCTTTGTTGTATCTTGCCAGAAGTTCAGAATGGAGCAAGTTTTTCAAATCAAGTCTGGTTGCTTCTTCGGTTTCCAAGGTCAAATGTTCCAAGTGTTCATTAATGGATACATTCAGAGCCTATATATGTAATGGTAAAATTAGGAATGATGATTTTGAGAATGCATCAAATGAGTTTCTTGATTGCATCTCCCATGATTCAACACAGAAGGTTTGGAGTTTCCTTGTCAATGGTTGCCGTTTTTTGAGATCGATCAAGGATCCTATGGATTCGGGCTGGTTAGTCTCTACCAGCAATTCCAGAGCAACGGATCCCGGAGCTCTGGCTAAGAAAAAATCTGAAGTATGTTACTTACACGAATCTGGAAATAGTATCCAGACCTGTGAAGAACAAACTTGCAATGAGAATGCAAGGCGCACATGCAAAGTTGTAAATCCCTCAAACCCTAATCGATTTCCGCTGCTAAAATCTAGATCATATTCTCCATTCTCTGGTTCTCTTCACATTTTCGCCCAAATTTTTATCTGTTCAGGAAAATCTTTGAAGGAGATATCTAATTCTACTCGGAAATATCAGCTTTGTTGGTATTGGACTATTGGTATCTGGAGCGGCGTTGTTCCTGCATTGCTCTTCGCAGCTGTTGGCTGGGCTAGTCAAGAAGTGGTGAAAGCAGAAGCAGGAGAGATGTTGGAAGCTAGGTGTCTGAAGAAAGCGGTGGTTCCGACCACCCTCATCGAGAATCCATCTCCCGGAAGCCTTCAATCCACTCGCCTCGCTCTCCATGTCAGCCTTGACTCTTCCCGTTCTTGTTTTCTCTACATAGCCTCTGGTCCTCACATCTATAATCTCCAGATTGCTCTGGAAGAATCTTCAGTCAACAAAGGAAAAGAAAGCCTCTTGATTCCTCAACAAACTGAGATTATTGCCTCGTCGATAATCAATCGCTGTCCTCATCGTTCCGAAATTCAGAGTATTGTTCTTGCCGACACTGAGAGTAATGGCTACTTAATATTAGGAAGTGTGGATTCTTATGGTCATCTTATTGTATCCAAACTAGATACATCTGGTAGAGATGTTGACAGGCTTACGTATTCAGTGTTGCCTCCTGATAATGGTATTGGGGAAGGAAGTTGGTCAGGACTTTGCTTTAGTCCAAGTCAATGGTCTATGGCAGCTGTTGCACGTAGCTTTTGCAAAACGATTGATATTTATGACCAGGACATACATGTTCGTACATTACGACCGCTTTGGCATCCTACTTCGTTAAACTTCATGCAGAATGTAGTTAATGGAAACCAGAGTCCTGTAATAGCTGTTACCGAAGGATGCCAGCTGACTTTATGGGACTTGAGAATGAAAGAAAATGGTGGTTGTTTACAACGAATTTGTGGTACCCCTGGTGACATCTTATATTCTGTCTGCAGTTCTTCCACTGGTAATGTTGCTGTGGGTGGAGCAGATCGTACTGTGACTGTTTATGATCCTCGCAGATGGTCGGCATTGTCTAGATGGGTGCACTGCTCTAAATTTGAGATAACAGGACTTGCTTTCTCAACAATTGACCCTGATTACATTTATATTCAAGGGGTTGATTATGAGGTCTTGTGTGGAACTTGGAAAGAAACTGACAAGTTGTTTTCATTTAGAGGTGACTCGAACTGGCTTGGCTTTAGTAAGAGCTCCAAAGAAGATGTTTTGGGTGGATGGTGTGATTCAGGTAGCATATTCATAGCTGATGTAGCAAGTGGAATTGATGAAATGATGTCTCTGTAG 3042 0.4464 MEMEMRSMEDTEIATDMTPSLVPLTFSLHHSNLHTHCSSCFSLLPLSPIPITPFLYCPSVTSSRVAGLLSNRHKLTCHNNSDEDEVSERISSGVRALATAITELRGELEPDDAVLEEAECALCAVLTNAVEVQDKEGRALGIAVYGPAFSWINHSCSPNACYRFILSPSSSSSSQESKLRIAPSSFRVNWGYFSALEEEEQNQGYGPRLIVRSIKRIKKGQEITIAYTDLLQSKAMRQLDLWSKYRFICCCMRCSVVPFTYVDHALQEISVSGCDFTSSSSSYNLVRDTAERRLNDSVDDIISEYLMAGDPEPCCEKLEKILMQGLCDELDNVEETPHYKFMLHPLHYLSLNAYTTLASAYKVRASDILSTTSTIYQNQLEAFDMSRTSAAYSLLLATTAHHLFNSESSLIASLANFWTGAGESLLYLARSSEWSKFFKSSLVASSVSKVKCSKCSLMDTFRAYICNGKIRNDDFENASNEFLDCISHDSTQKVWSFLVNGCRFLRSIKDPMDSGWLVSTSNSRATDPGALAKKKSEVCYLHESGNSIQTCEEQTCNENARRTCKVVNPSNPNRFPLLKSRSYSPFSGSLHIFAQIFICSGKSLKEISNSTRKYQLCWYWTIGIWSGVVPALLFAAVGWASQEVVKAEAGEMLEARCLKKAVVPTTLIENPSPGSLQSTRLALHVSLDSSRSCFLYIASGPHIYNLQIALEESSVNKGKESLLIPQQTEIIASSIINRCPHRSEIQSIVLADTESNGYLILGSVDSYGHLIVSKLDTSGRDVDRLTYSVLPPDNGIGEGSWSGLCFSPSQWSMAAVARSFCKTIDIYDQDIHVRTLRPLWHPTSLNFMQNVVNGNQSPVIAVTEGCQLTLWDLRMKENGGCLQRICGTPGDILYSVCSSSTGNVAVGGADRTVTVYDPRRWSALSRWVHCSKFEITGLAFSTIDPDYIYIQGVDYEVLCGTWKETDKLFSFRGDSNWLGFSKSSKEDVLGGWCDSGSIFIADVASGIDEMMSL 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03985 1013 PANTHER PROTEIN SET DOMAIN GROUP 41 59 562 - -
Aip05g03985 1013 PANTHER PROTEIN SET DOMAIN GROUP 41 3 58 - -
Aip05g03985 1013 Gene3D SET domain 97 256 IPR046341 -
Aip05g03985 1013 SUPERFAMILY SET domain 99 255 IPR046341 -
Aip05g03985 1013 CDD SET_SMYD 107 254 - -
Aip05g03985 1013 Gene3D - 703 968 IPR015943 GO:0005515
Aip05g03985 1013 ProSiteProfiles SET domain profile. 84 228 IPR001214 GO:0005515
Aip05g03985 1013 Pfam SET domain 133 227 IPR001214 GO:0005515
Aip05g03985 1013 SUPERFAMILY WD40 repeat-like 740 1006 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03985 Aip-Chr5 148121025 148129218 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aip05g03985 SET 2.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03985 - - ahf:112802999 969.533