Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03978 ATGAAGAGTTTTGTAAGCTATATGGCTATTGTGGAGAAAAATAAGCCTTATGTTTCAATGCTCTTTATTCAGTTTGTATATGCAGGCATGGCTTTATTATCTAAGGCTGCAATTTCCAAAGGAATGAACCCTTTTGTTTTTGTTGTTTATAGACAAGCCTTTGCATCAGTTTCCTTATCTCCATTTGCTTTCTTTGACAGTAAGCAGAGTGCTCCCTTGTCATGCAAGTTACTGTGCAAGTTGTTTCTTATTTCACTTGTTGGGTTGACAACAAGTTCAACACTTTACTATGTTTCAATCAACTACACTTCTGCAACATTTGCTGCAGCCTCCACTAACACTGTCCCAGCTATTACTTTTATCATGGCAGCTTTAATTAGGGTGGAAAGCATTTCCATAAAAAATGTGCATGGAGTTGCTAAGATTTTTGGTTCTGCTCTAAGCCTTTCTGGGGCAATAACATTTGCCTTAGTCAAAGGACCTGCCCTTGATTTCATGAGATGGTATCCACAAAATCAGAACCATTCATCATCAACTTCTGTGGTTCACTCCAAAGGGGATAATATCAAAGGTGCTCTTATGATGCTCTCAGCAAACATTGCTTGGTCCTTATGGCTTATTTTGCAGGGATTTGTTGTGAAGGAATATCCAGCAAAATTTAGGCTTACAAGTGTTCAATGCTTGTTTAGCTTCATTCAATCATCTGTTTTGGCTTTATCAGTGGAGAGAGATCCATCAGCATGGAAGCTTGGATGGGATATTCATCTTCTTTCAGTGGCCTACTGTGGTGTAATTGTAACAGGGATTTGTTATTGGCTACAAGTGTGTACAATAGAGACAAAAGGACCAGTTTTCACAGCCATGTTCACTCCTCTTGCTCTCATAATCACAGCAATGTTATCAGCACTTTTGTGGAAAGAAACTCTTTACTGGGGAAGTATTGGTGGCACCATTTTATTGGTTGTTGGATTGTATAGCGTATTGTGGGGGAAGAGCAAGGAGAGTGTAGAAAGGAAAAATCATGAAGTTGAAGAAGTTGAACAAATTAAAGAGGAAAACAGATTGGAGTGCATTATACAGAATTGA 1086 0.3858 MKSFVSYMAIVEKNKPYVSMLFIQFVYAGMALLSKAAISKGMNPFVFVVYRQAFASVSLSPFAFFDSKQSAPLSCKLLCKLFLISLVGLTTSSTLYYVSINYTSATFAAASTNTVPAITFIMAALIRVESISIKNVHGVAKIFGSALSLSGAITFALVKGPALDFMRWYPQNQNHSSSTSVVHSKGDNIKGALMMLSANIAWSLWLILQGFVVKEYPAKFRLTSVQCLFSFIQSSVLALSVERDPSAWKLGWDIHLLSVAYCGVIVTGICYWLQVCTIETKGPVFTAMFTPLALIITAMLSALLWKETLYWGSIGGTILLVVGLYSVLWGKSKESVERKNHEVEEVEQIKEENRLECIIQN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03978 361 PANTHER WAT1-RELATED PROTEIN 13 338 - -
Aip05g03978 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 148 - -
Aip05g03978 361 Coils Coil 336 356 - -
Aip05g03978 361 Pfam EamA-like transporter family 16 149 IPR000620 GO:0016020|GO:0016021
Aip05g03978 361 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020|GO:0016021
Aip05g03978 361 PANTHER WAT1-RELATED PROTEIN 13 338 IPR030184 GO:0016021|GO:0022857
Aip05g03978 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03978 Aip-Chr5 148068136 148071516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03978 15 345 Nodulin-like Gene Family AT2G39510 38.138 1.97e-81 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03978 - - gsj:114390241 577.015