Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03975 ATGGAAGGGAATTTGCCACAGGGTGGTACTGTTCAAGGTGGAGCTTCTTTTGGTGGTTTTGATTTGCCTGCTTCAATGCGGCTTCATCACCAATCACAGCATGCGCCGCATGCCATGACCCAGCATCAAAATCATCCTTGCCATGGGTCTTCGGGGAAGTCCTCGAATTTTCCACTTACAATGTGTGATCAGACTATGTCAATGGCTGAGTTTGGTAAGGGAGATAGAAACAAAAACTCATTAAGCGATGAAGAAGAGCCGAGTTTGACTGAAGATGGTGGTGAGGGTCATCATGAAGCAGGCAGAACGAAGAAGGGGTCGCCTTGGCAACGGATCAAGTGGACCGATAAGATGGTGAAGCTTATGATAACAGCTGTTTCATATATAGGCGAAGATTCGACTTCTGATGGTGCCGGAAGAAGAAAATTCATGGTCCTTCAAAAAAAGGGCAAATGGAAGACTATTTCCAAGGCCATGGCTGAAAGGGGTTATCATGTTTCCCCTCAGCAATGTGAGGATAAATTCAATGATCTCAATAAACGCTATAAAAGGCTTAATGAAATGCTTGGCAGGGGTACTTCTTGTCAGGTTGTTGAAAATCCGGCCCTGTTGGATGTAATTGACTATCTTTCTGAGAAAGAAAAGGATGATGTTCGGAAAATACTAAACTCAAAACAGCTTTTTTATGAGGAGATGTGTTCTTACCATAATAATAATAGATTGCATTTACCCCATGACATTGCATTGCAACGATCACTGCAGCTAGCTCTCCGAAGTAGAGATGATCATGACGAAGATGATCAAGATATGGAAACTGATGATCATGATGAATTTGAAGAGAATCATGCTTCCCATGGGGATTGCAGAGGAATCCACGGGGCATTAGTCGGACCTATGAAGAAATTAAAACAAGGACAAGACCAAGAAGATTCTTCTACTTTTGGGAATTCTCTAAATTGTCAAGAATATAACAAAAGTTTGCACACTCATGGACAGATGGTCCAATCAGATGTAAATCAAGCTTTACCTGAAAACTTGAGAGCAGCATGGTTACAGAAGCAATGGGTTGAGTCTCGCGCAATTCAGTTAGAAGAACAGAAATTACAGATACAGATCGAGATGTTGGAAGTAGAGAAGCAGAGATTCAAGTGGCAGAAGTTCAGTAAGAAGAAAGATCGGGAGTTGGAGAAGTTGAAGCTGGAGAATGAAAGGATGAAGCTTGAGAACGAACGTCTTGCTTTAGAGCTGAAGCGAAAGGAATTGGTTTCTGGTTTGAACTAG 1281 0.4208 MEGNLPQGGTVQGGASFGGFDLPASMRLHHQSQHAPHAMTQHQNHPCHGSSGKSSNFPLTMCDQTMSMAEFGKGDRNKNSLSDEEEPSLTEDGGEGHHEAGRTKKGSPWQRIKWTDKMVKLMITAVSYIGEDSTSDGAGRRKFMVLQKKGKWKTISKAMAERGYHVSPQQCEDKFNDLNKRYKRLNEMLGRGTSCQVVENPALLDVIDYLSEKEKDDVRKILNSKQLFYEEMCSYHNNNRLHLPHDIALQRSLQLALRSRDDHDEDDQDMETDDHDEFEENHASHGDCRGIHGALVGPMKKLKQGQDQEDSSTFGNSLNCQEYNKSLHTHGQMVQSDVNQALPENLRAAWLQKQWVESRAIQLEEQKLQIQIEMLEVEKQRFKWQKFSKKKDRELEKLKLENERMKLENERLALELKRKELVSGLN 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03975 426 MobiDBLite consensus disorder prediction 258 287 - -
Aip05g03975 426 MobiDBLite consensus disorder prediction 76 109 - -
Aip05g03975 426 PANTHER F16F4.11 PROTEIN 1 423 - -
Aip05g03975 426 Coils Coil 358 380 - -
Aip05g03975 426 Gene3D - 114 184 - -
Aip05g03975 426 PANTHER F16F4.11 PROTEIN-RELATED 1 423 - -
Aip05g03975 426 MobiDBLite consensus disorder prediction 34 63 - -
Aip05g03975 426 Coils Coil 388 422 - -
Aip05g03975 426 MobiDBLite consensus disorder prediction 1 109 - -
Aip05g03975 426 Pfam Myb/SANT-like DNA-binding domain 113 235 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03975 Aip-Chr5 147998464 148000447 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aip05g03975 Myb_DNA-bind_4 1e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03975 - - pvu:PHAVU_007G079600g 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03975 05 147998464 148000447 Aip09g03280 09 138927696 138930131 PCT