Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03969 ATGGCATCAAATCAGGCTTCCCTCAATCACACCAACAAACAAGTCTTTCATAGCAACAACAACAATGACCTTGAGCAACAAGCAACAACAACAACACCACTTGAGATCATTGAAACCAAGAAGGAGGAAGAAGAAGAAGAAGATTTCTTTGACTACTCAAGAAGATCTCAATGGCTACGTGCTGCTGTTCTTGGAGCCAATGATGGGTTGGTCTCAACAGCATCACTAATGATGGGTGTTGGAGCAGTGAAACAAGACATCAAAGCCATGATCCTCACCGGTTTTGCAGGCTTAGTTGCCGGCGCTTGCAGCATGGCCATAGGTGAGTTTGTGTCTGTCTACTCGCAACTCGACGTTGAACTCGCTCAAATGAAGAGGGACAAAGAAAGAGGAAACAACAACAACAACAGCAACAGCAACAATTCTGATAAAGAAGAAGAAGAAGAAGAAGAAAGATTGCCAAACCCTTTACAAGCAGCAGCAGCATCAGCTTTGGCATTTTCTATTGGTGCAATGGTGCCATTGCTTTCTGCTTCTTTCATAAGAGAATATAAGGTGAGGCTTGGTGTGGTTGTGGCTGCTGTAACCTTTGCTTTGGTTCTGTTTGGTTGGTTAGGTGCTGTTCTTGGTAAGGTTCCTGTTTTTAGGTCTTCTTTAAGGGTTCTTCTTGGTGGTTGGATGGCCATGACTATTACTTTTGCTCTTACCAAGTTGATAGGATCAAGTGCTCTttaa 735 0.4327 MASNQASLNHTNKQVFHSNNNNDLEQQATTTTPLEIIETKKEEEEEEDFFDYSRRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDVELAQMKRDKERGNNNNNSNSNNSDKEEEEEEERLPNPLQAAAASALAFSIGAMVPLLSASFIREYKVRLGVVVAAVTFALVLFGWLGAVLGKVPVFRSSLRVLLGGWMAMTITFALTKLIGSSAL 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03969 244 Pfam VIT family 59 138 IPR008217 GO:0005384|GO:0030026
Aip05g03969 244 Pfam VIT family 148 236 IPR008217 GO:0005384|GO:0030026
Aip05g03969 244 CDD Nodulin-21 57 213 - -
Aip05g03969 244 Coils Coil 114 134 - -
Aip05g03969 244 MobiDBLite consensus disorder prediction 125 154 - -
Aip05g03969 244 MobiDBLite consensus disorder prediction 1 21 - -
Aip05g03969 244 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 24 241 - -
Aip05g03969 244 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 24 241 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03969 Aip-Chr5 147971388 147972122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03969 43 244 Nodulin-like Gene Family AT3G43660 67.822 4.36e-99 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03969 K22736 - gmx:100807991 313.538