Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03968 ATGGACCCGAAGTTCATGGGAAAGCCACCTCCGGCCACCACCGTAGAGATAGAACGCATGCCGGAGCGAGGCTCCCACCACCGCCGCTCCCACTCCGACACCTCTTTCCGCTTCGCCGGAAACTTCGACGACCTCCTCCTCTTCGACCCTTCCGACCTCGACATCTCCAACCTCCCTTCTCCTCTTCCACTTCCGACCCCCGCCACCGCAAGCGGCGGAATCCCCATGGCTATCGATTCCGATGAGTCTAGCGGTCAGAGCGGGATGGGAAGAGCCGGTGGCGGTGCTCCGATCGGGCACCTACGGAGCTTGTCAGTCGACTCGGACTTCTTCGATGGCTTCGGGTTCGGCGGCTCCGGAGAGGAGAAGTCAGGCGGGAAAAGTGGCGGTGGAGGAGGAGAGAGAAGAGTTGGGCATCACCGGCATAGTAATTCGATGGATGGATCATCAACGACGTCGTTTGAAGCTGAGTCATCGATGATGGATGGTGTGAAGAAAGCCATGGCACCTGATAAGCTCGCTGAGCTTGCTCTTATTGACCCCAAGCGAGCCAAGAGGATTCTTGCAAATAGACAATCAGCTGCAAGATCAAAGGAGAGAAAGATTCGGTACACAAGTGAGCTTGAGAAGAAGGTGCAGACTCTTCAGACTGAAGCAACTAATCTCTCTGCTCAACTTACCATGCTCCAGAGAGACACGACGGATTTAACTGCGGAGAATAAGGAGCTCAAACTGCGGTTGGAGGCTATGGAACAAGAAGCACAGCTTAGAGAAGATCTCAATTCGGCATTGAAGGAAGAATTGCAGCGCCTTAGAGAACAGAGTAACCGCTTGGGTGCTATGAGTGGTGGTAACCATAATTTTGGTGGTATGTTCTCTCAATTGGCTTCTCAATTAGCCATGCAACAGCTGAGTAATCATCCTCCGCCGCAACAGCAGCAGGTCGGCGTGCCTCCTCATCCCTCTGATCAGCCTTTCCAAGGGCAGCACGGGCAGCGACGCCCGAGCTTCATGGACTTCAATCAGAAGAAGTAG 1035 0.543 MDPKFMGKPPPATTVEIERMPERGSHHRRSHSDTSFRFAGNFDDLLLFDPSDLDISNLPSPLPLPTPATASGGIPMAIDSDESSGQSGMGRAGGGAPIGHLRSLSVDSDFFDGFGFGGSGEEKSGGKSGGGGGERRVGHHRHSNSMDGSSTTSFEAESSMMDGVKKAMAPDKLAELALIDPKRAKRILANRQSAARSKERKIRYTSELEKKVQTLQTEATNLSAQLTMLQRDTTDLTAENKELKLRLEAMEQEAQLREDLNSALKEELQRLREQSNRLGAMSGGNHNFGGMFSQLASQLAMQQLSNHPPPQQQQVGVPPHPSDQPFQGQHGQRRPSFMDFNQKK 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03968 344 Coils Coil 205 281 - -
Aip05g03968 344 MobiDBLite consensus disorder prediction 302 336 - -
Aip05g03968 344 MobiDBLite consensus disorder prediction 144 158 - -
Aip05g03968 344 SMART brlzneu 178 242 IPR004827 GO:0003700|GO:0006355
Aip05g03968 344 Pfam bZIP transcription factor 182 240 IPR004827 GO:0003700|GO:0006355
Aip05g03968 344 SUPERFAMILY Leucine zipper domain 182 234 IPR046347 GO:0003700|GO:0006355
Aip05g03968 344 MobiDBLite consensus disorder prediction 64 96 - -
Aip05g03968 344 MobiDBLite consensus disorder prediction 1 36 - -
Aip05g03968 344 CDD bZIP_plant_RF2 183 232 IPR044759 GO:0003700|GO:0006355
Aip05g03968 344 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 180 243 IPR004827 GO:0003700|GO:0006355
Aip05g03968 344 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 8 340 - -
Aip05g03968 344 MobiDBLite consensus disorder prediction 19 34 - -
Aip05g03968 344 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 8 340 - -
Aip05g03968 344 MobiDBLite consensus disorder prediction 115 159 - -
Aip05g03968 344 MobiDBLite consensus disorder prediction 302 344 - -
Aip05g03968 344 Gene3D - 181 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03968 Aip-Chr5 147958323 147961295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03968 7 326 bZIP Transcription Factor Family AT1G43700 48.148 1.51e-77 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip05g03968 bZIP_1 1.8e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03968 K20557 - gmx:778142 409.068