Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip05g03949 | ATGGACCAAGCACTGAGCCGTCTCAACGGCATGCCACCCCTTTCCGAACCACCTCCCAACAACCCCAGAACCAAGCAGACCTCCCGAGACACCAGCACTGCCCCCACTGCCGGACCCATGAGGTACCGCGGCGTCAGGCGGAGGCCATGGGGCCGTTATGCCGCCGAGATAAGGGACCCGCAGTCCAAGGAGCGCCGTTGGCTGGGGACTTTCGACACTGCGGAGGAAGCCGCCTGCGCCTACGACTGCGCCGCCCGAGCCATGCGTGGCCATAAGGCAACAACCAACTTCGTGTACCATACTTTACCTTCTTACCCTTCTTCCATCACCATCACCAACAACCATAGCAATCTCCTTAACTGCCATAACCACTTCAGCTTCCCTTGTCATCATAACCAACTCTTCAACGGCCATAAACGCCACTTCGGGGTTTGGTCTGACCCTTTCTCTGCTTCAACCTTTCAGGAACAGCGAAACCTTGACTCCATCAACATGCTTCTCCACCGAGACTTAGTAGCCTCTTCTTCCTCCGACAATTTATCCTACAACACGGGCAGTTTTGTCAATTCACATCCTGACACGAGCAATCTCGGTTGTGGCGGTGGAAGCAATAAGACCGATAATACTAACAATAATGAAGCTGACGGTGGTGGTGAAGAAGACTCAAAGGAGCAATTCTATGAAGGTTCAGGGTCGTCAGGGTTGTTGGAAGAAATAGTTAAGGGTTTCTTGAAGAAAAAGCCAAAGCTCAACAAATGTGAGAGATTGTTAGGTACCAGGACCACTGCTTCAGACGGTTCTTGCCACTCACCATTTCCTCTTCGTCCTCTTCCTCTGGTTGTTTTCCCCGAGGAGTCGAAGAAAGACGAGGGTTTCGGCGTTCATTCAGATCAACAGGGTTTCCAATACATGCAGCAGCTTGGTGGCGGTTTCAATAATAATGGCTTTAGCAATATGGTTATGCTGCCTAACATGATGATGAATAACGATAATAATCATGCAGAAGTAGAGTGCTCTATCGTAGAAAACCTTTTTCGGGATGCATAA | 1047 | 0.5033 | MDQALSRLNGMPPLSEPPPNNPRTKQTSRDTSTAPTAGPMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGHKATTNFVYHTLPSYPSSITITNNHSNLLNCHNHFSFPCHHNQLFNGHKRHFGVWSDPFSASTFQEQRNLDSINMLLHRDLVASSSSDNLSYNTGSFVNSHPDTSNLGCGGGSNKTDNTNNNEADGGGEEDSKEQFYEGSGSSGLLEEIVKGFLKKKPKLNKCERLLGTRTTASDGSCHSPFPLRPLPLVVFPEESKKDEGFGVHSDQQGFQYMQQLGGGFNNNGFSNMVMLPNMMMNNDNNHAEVECSIVENLFRDA | 348 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip05g03949 | 348 | MobiDBLite | consensus disorder prediction | 21 | 35 | - | - | |
Aip05g03949 | 348 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 35 | 189 | - | - | |
Aip05g03949 | 348 | ProSiteProfiles | AP2/ERF domain profile. | 41 | 98 | IPR001471 | GO:0003700|GO:0006355 | |
Aip05g03949 | 348 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE | 35 | 189 | - | - | |
Aip05g03949 | 348 | Gene3D | AP2/ERF domain | 40 | 99 | IPR036955 | GO:0003700|GO:0006355 | |
Aip05g03949 | 348 | SMART | rav1_2 | 41 | 104 | IPR001471 | GO:0003700|GO:0006355 | |
Aip05g03949 | 348 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
Aip05g03949 | 348 | MobiDBLite | consensus disorder prediction | 193 | 215 | - | - | |
Aip05g03949 | 348 | Pfam | AP2 domain | 41 | 91 | IPR001471 | GO:0003700|GO:0006355 | |
Aip05g03949 | 348 | CDD | AP2 | 41 | 97 | IPR001471 | GO:0003700|GO:0006355 | |
Aip05g03949 | 348 | SUPERFAMILY | DNA-binding domain | 41 | 99 | IPR016177 | GO:0003677 | |
Aip05g03949 | 348 | PRINTS | Ethylene responsive element binding protein signature | 42 | 53 | IPR001471 | GO:0003700|GO:0006355 | |
Aip05g03949 | 348 | PRINTS | Ethylene responsive element binding protein signature | 64 | 80 | IPR001471 | GO:0003700|GO:0006355 | |
Aip05g03949 | 348 | MobiDBLite | consensus disorder prediction | 193 | 229 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip05g03949 | Aip-Chr5 | 147752147 | 147753193 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip05g03949 | 40 | 246 | AP2-EREBP Transcription Factor Family | AT1G24590 | 42.593 | 1.77e-36 | 132 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Aip05g03949 | AP2 | 1.6e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip05g03949 | - | - | aip:107641556 | 668.307 |