Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03940 ATGGATGATTTTTGGAGCCTGATTTGTATGGACTATGATTGTTCCAAGGCCAGAGAAAATCCTTTCTGTAATGATTTCAAGTTCTTGCAAGATCATTCCAAATGCATCAACAATTTGTTGATCATTTGCTTTGATATCTTGCTGCTGATCATGCTGTCATTCACTATGATCAAGAGGACTTCATCAACTCCATTTCATGGCCAAACGCGAGCCGAAAGATACTCAAATTTGCAGCTAGTTTCTGCCACAAGCAATGGAGTTCTTGGCTTGGTGCATTCATGCTTAGGAATTTGGATTTTGGAGGAGATGATAAGAAAAAACCACACTGCATTGCCTCTTAATTGGTGGTTGGTAGAATTCTTTCAAGGAATCACATGGCTTTTAGCATCCTTCACAGTATTAAGTCTTCGGCTTAAACATTATCCGCAGAGGACTCTCCCTGAAGATAGCTCTAGATGTTCTATCTTTTCCAGCATCAATCTTAGTACTGTTATGCACATTCAAATATCTGTAGAGAGGATAAATCAATATATGTATATACCAAGTGAGGCCCCAGAAGTTATAGAAGGAAATCGCCCTCCGGTTAATTGGCCAGTTGCAGGCAAAGTAGAAATTAGTAACTTGCAGATAAGATACAGGGCTAATGGACCACTTGTACTCCATGGAATTACATGCACATTTGAAGGAGGACACAAGATTGGTATTGTTGGCAGGACAGGAAGTGGGAAGTCCACTCTTATTAGTGCTTTATTTCGCCTTGTCGAGCCGGCCGGTGGAAGGATTGTAATGGATGGCATAGACATATCCTCGATCGGCCTTCATGATTTGAGGTCACATTTAGGTGTTATACCTCAGGATCCTACTCTTTTTAATGGAACAGTTAGATATAATTTGGACCCTTTGTCTCAACATTCTGATGAAGAGATATGGGAGGTTCTTGGAAAGTGTCAGTTGCGAGAAGCCGTGCAAGAAAAAGAAAAGGGCTTAGACTCCTCAGTTGTTGAAGATGGATCGAATTGGAGTATGGGACAAAGGCAGTTATTCTGTCTAGGCCGCGCCCTTTTGAGGCGAAGTAGGATATTGGTGCTCGATGAAGCAACCGCATCAATTGATAATGCAACAGATCTTATTTTGCAGAAAACAATTAGAACAGAATTTGCAGATTGTACAGTGATCACAGTAGCACACAGGATACCAACTGTGATGGATTGCACCAAGGTTCTCTCCATAAGTGATGGAAAATTGGTAGAGTATGATGAGCCAAAGAAGTTAATGAAGAGAGAAGGGTCATTGTTTGGGAAGCTTGTGAAGGAATACTGGTCTCATTTTCAGTCTGCAGAATCTCATTGA 1350 0.4104 MDDFWSLICMDYDCSKARENPFCNDFKFLQDHSKCINNLLIICFDILLLIMLSFTMIKRTSSTPFHGQTRAERYSNLQLVSATSNGVLGLVHSCLGIWILEEMIRKNHTALPLNWWLVEFFQGITWLLASFTVLSLRLKHYPQRTLPEDSSRCSIFSSINLSTVMHIQISVERINQYMYIPSEAPEVIEGNRPPVNWPVAGKVEISNLQIRYRANGPLVLHGITCTFEGGHKIGIVGRTGSGKSTLISALFRLVEPAGGRIVMDGIDISSIGLHDLRSHLGVIPQDPTLFNGTVRYNLDPLSQHSDEEIWEVLGKCQLREAVQEKEKGLDSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLSISDGKLVEYDEPKKLMKREGSLFGKLVKEYWSHFQSAESH 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03940 449 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 72 145 - -
Aip05g03940 449 Gene3D - 187 438 IPR027417 -
Aip05g03940 449 CDD ABCC_MRP_domain2 201 421 - -
Aip05g03940 449 Pfam ABC transporter 220 368 IPR003439 GO:0005524
Aip05g03940 449 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 155 449 - -
Aip05g03940 449 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 155 449 - -
Aip05g03940 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 430 IPR027417 -
Aip05g03940 449 SMART AAA_5 229 421 IPR003593 -
Aip05g03940 449 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 203 437 IPR003439 GO:0005524
Aip05g03940 449 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 72 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03940 Aip-Chr5 147608194 147610120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03940 199 449 Calmodulin-binding Proteins AT2G36910 29.134 2.00e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03940 K05666 - gmx:100787314 520.776