Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03928 ATGGAGCAGAAGCATGTTCTGTTGTCAGCATTGAGTGTTGGTGTTGGGTTGGGAGTGGGTCTTGGGTTGAGTACAGGGCAAGCTGTTCAGAAATGGGTTGGTGGAAGCAAGCTTGATTCTGATGAGATTTCTGGGGACCTCATTGTTCTTGAGCTCAAGAAGCTTCTGCTTGATGGCAGAGACAGCAGAATCACATTTGATGACTTCCCTTATTACTTAAGCGAAAAAACTCGAGTGTTGTTGACAAGTGCTGCACATGTTCATTTGAAGCATCTTGATTTTTCCAAGCACACCAGGAACCTTTCTCCAGCAAGCAGAGCTATTTTGCTATCTGGTCCTGGAGAACTATACCAGCAAATGCTTGCCAGGGCTTTGGCACATAGCTTCGAATCGAAGTTGCTGTTGCTAGATATTAATGACTTCTCAGTGAAGATGCAGAGCAAATATGGATGTCCAAGAAAAGAACCTAAGTCCATATCAGAGATGACTTTCGAGCGAATGTCCGGTTTATTTGGTTCCCTTTCAATCCTCCCTTCAACTGCTGAAACTACAGGTACTTTACATCAACAAAGTGTCGATGCTGAAAGTTCGAAAAATGTTTCAAAACTTCGGAGGAATGGCTCTGCTGCATCTGATATAAGTAGTGCTGCTTCTCATTGTGGTGTAGCAAGTCCAGCTCCTTTAAAGCGTACAAGTAGCTTGTGTTTCAATGAAAAGCTATTTGTTCAGTCACTTTACAAGGTCTTGGTTTCTGTCTCAGAAACTGGTCCCATCATTTTATACATTAGGGACGTTGAGAGGCTTGTTCTACAATCACCAAGGTTATACAACTTGTTACATAAAATGATAAAGAAGCTTTCAGGATCTGTGATAGTACTTGCTTCACATTTAATAGATACAGAAGATGAATGCAAAGAAATTGATGAAAGACTCACTATGGTGTTCCCATACAACATTGACATAAATCCTCCTGAAGATGCAACTCATCTTTGCAACTGGAAATCTCAACTGGAAGAGGACATGAGAATGATTCAATTCCAAGATAACAAAAACCACATCACAGAAGTACTCGCAGCGAATGACATCGATTGTTATGACCTGTCATCAATATGCCATGCAGACACTATGGTACTCAGTACTTACATTGAAGAAATTGTGGTATCTGCAATATCTTACCATTTGATGAATACCAAGGATCCTGAATATCGAAATGGAAAGCTAGTTATATCAGCCAACAGTTTGTCCCATGGATTGAGCCTGTTCCAAGAAGGCAAGAGTAGTGGGAATTTGAAGACTAATGATTCAAACAAGGAAAATGCTGATGGCATTGCCGGAGCCAATGTTCGGTGTGATGGCCAGGCACCTGAAAACAAAAATGAAACATCTATCCCTGTAACAAAGAAAGATGGCGAAAATACTGCTCCTGCAAAAGCAGAAGTTCCTGACAACGAGTTTGAAAAGCGCATTCGACCAGAAGTTATCCCTGCAAATGAGATAGGAGTTACTTTTGCAGATATTGGTTCATTGGATGAGATCAAAGAATCACTTCAAGAACTGGTCATGCTTCCTCTTAGAAGACCAGACCTCTTCAAAGGTGGACTTCTGAAGCCATGTAGAGGCATATTGCTTTTTGGACCTCCTGGGACTGGAAAGACAATGCTGGCAAAGGCAATTGCGAATGAAGCCGGAGCTAGTTTCATCAATGTATCAATGTCCACCATCACTTCAAAGTGGTTTGGAGAAGATGAAAAGAATGTTAGAGCTTTGTTCACACTGGCTGCAAAGGTTGCCCCTACTATCATCTTTGTTGATGAAGTTGACAGCATGCTTGGACAGCGCACCCGAGTTGGAGAGCATGAAGCCATGAGGAAGATCAAGAATGAGTTCATGACACATTGGGATGGACTATTAACTAGACCTGGTGAACAAATTCTGGTTCTTGCTGCAACTAACAGGCCATTTGATCTTGATGAAGCAATTATAAGACGATTCGAGCGCAGGATTATGGTTGGTCTTCCATCTGTTGAGAACAGAGAAATGATCCTGAAAACTCTCCTAGCTAAGGAAAAACACGAAAACTTAGACTTCAAAGAGCTTGCAGCCATGACAGAAGGATATACTGGAAGTGATCTTAAGAATTTGTGCATCACTGCGGCTTATCGACCTGTTAGGGAGTTATTACAGCAGGAGAGAAAGAAGGATATGGAAAAGAAGAAAAAAGAGACAGAAGGCCAAAGCTCTGAAGATGCATCAGAGAATAAAGAAGATCATCAAATTACTCTGAGGTCTTTAAACATGGAAGACATGAGACAGGCAAAGAGTCAGGTGGCTGCTAGTTTTGCATCCGAAGGAACGGTTATGAATGAGCTGAAACAATGGAATGAATTATATGGAGAAGGAGGTTCAAGGAAGAAGCAGCAACTCACTTACTTCCTTTAA 2439 0.4153 MEQKHVLLSALSVGVGLGVGLGLSTGQAVQKWVGGSKLDSDEISGDLIVLELKKLLLDGRDSRITFDDFPYYLSEKTRVLLTSAAHVHLKHLDFSKHTRNLSPASRAILLSGPGELYQQMLARALAHSFESKLLLLDINDFSVKMQSKYGCPRKEPKSISEMTFERMSGLFGSLSILPSTAETTGTLHQQSVDAESSKNVSKLRRNGSAASDISSAASHCGVASPAPLKRTSSLCFNEKLFVQSLYKVLVSVSETGPIILYIRDVERLVLQSPRLYNLLHKMIKKLSGSVIVLASHLIDTEDECKEIDERLTMVFPYNIDINPPEDATHLCNWKSQLEEDMRMIQFQDNKNHITEVLAANDIDCYDLSSICHADTMVLSTYIEEIVVSAISYHLMNTKDPEYRNGKLVISANSLSHGLSLFQEGKSSGNLKTNDSNKENADGIAGANVRCDGQAPENKNETSIPVTKKDGENTAPAKAEVPDNEFEKRIRPEVIPANEIGVTFADIGSLDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTRPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREMILKTLLAKEKHENLDFKELAAMTEGYTGSDLKNLCITAAYRPVRELLQQERKKDMEKKKKETEGQSSEDASENKEDHQITLRSLNMEDMRQAKSQVAASFASEGTVMNELKQWNELYGEGGSRKKQQLTYFL 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03928 812 CDD AAA 539 672 - -
Aip05g03928 812 SMART AAA_5 537 674 IPR003593 -
Aip05g03928 812 ProSitePatterns AAA-protein family signature. 644 663 IPR003960 GO:0005524|GO:0016887
Aip05g03928 812 MobiDBLite consensus disorder prediction 425 482 - -
Aip05g03928 812 MobiDBLite consensus disorder prediction 731 757 - -
Aip05g03928 812 Gene3D - 500 672 IPR027417 -
Aip05g03928 812 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 812 - -
Aip05g03928 812 Pfam ATPase family associated with various cellular activities (AAA) 541 671 IPR003959 GO:0005524|GO:0016887
Aip05g03928 812 Coils Coil 747 767 - -
Aip05g03928 812 Gene3D - 673 746 - -
Aip05g03928 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 345 IPR027417 -
Aip05g03928 812 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 812 - -
Aip05g03928 812 Pfam AAA+ lid domain 693 737 IPR041569 -
Aip05g03928 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 500 729 IPR027417 -
Aip05g03928 812 MobiDBLite consensus disorder prediction 425 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03928 Aip-Chr5 147475447 147481062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03928 457 730 Calmodulin-binding Proteins AT3G56690 38.516 3.04e-45 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03928 - - gmx:100817952 1283.09