Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03921 ATGAGTAATGAGGAGGATTGGGATCTCTTTGCCATAGTTAGAAGCTGCAAAGCTGCAAACAACACTGCACAAACTCCACAAGACACAACAACAAAAACTAGTAGTAATAGCATCATGTCTACTTCTTCTACAACTTGCTTGGCCACTACTACTATCACTGCAGAACAAAATGATGGTCCATTTTCTTCTAACAATTTTGTGCAACCCAGGACCAATGGTTTCCAAGAGTTAGAACAATTGCTCAATACCTTTAACCCCACCATCACCACCACCACCACTACCACTAGTGCCCATGGCATCAATTCTAATAATCCTCTCACTTTTCCTCATTTCATTGCACTGCCATCCACCCTTGGAGCCTCCACTTCTGGTTTTGATGATAGATTCCACCACCACCAACAACATCAACAAAAGCAGCATAATCTACTACAGGTTCAAGTTCCCCAAACTAGTACAACTACTTCTCTGACTTTATTACCAAGCTCAGAATCACAATCACAATCACAAACGCAAACACCCAGATCAAGAAAAAGAAAAAGCCAACAGAAAAGAATGGTATGCCATGTAACCGCAGATAACCTCTCATCAGATTTGTGGGCATGGCGTAAATATGGCCAAAAACCCATCAAGGGTTCCCCATATCCAAGAAACTATTACAGATGCAGCAGCTGCAAAGGTTGTGTAGCAAGAAAGCAAGTAGAGCGAAGCTTATCAGACCCCACCATGTTTGTTGTAACTTACACCGGAGAACACAAGCACGCTAAACCGGCTCACCGGAACTCACTCGCCGGAAGTACCCGGAAACCATCCACGCCTCGCGTTGCAGTTAAGTATTTTTTTTGTGACTCTTGCAGTTAA 858 0.4324 MSNEEDWDLFAIVRSCKAANNTAQTPQDTTTKTSSNSIMSTSSTTCLATTTITAEQNDGPFSSNNFVQPRTNGFQELEQLLNTFNPTITTTTTTTSAHGINSNNPLTFPHFIALPSTLGASTSGFDDRFHHHQQHQQKQHNLLQVQVPQTSTTTSLTLLPSSESQSQSQTQTPRSRKRKSQQKRMVCHVTADNLSSDLWAWRKYGQKPIKGSPYPRNYYRCSSCKGCVARKQVERSLSDPTMFVVTYTGEHKHAKPAHRNSLAGSTRKPSTPRVAVKYFFCDSCS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03921 285 MobiDBLite consensus disorder prediction 149 185 - -
Aip05g03921 285 MobiDBLite consensus disorder prediction 123 142 - -
Aip05g03921 285 SUPERFAMILY WRKY DNA-binding domain 190 256 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip05g03921 285 Gene3D WRKY domain 178 249 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip05g03921 285 Pfam WRKY DNA -binding domain 197 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip05g03921 285 ProSiteProfiles WRKY domain profile. 190 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip05g03921 285 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 270 IPR044810 GO:0003700
Aip05g03921 285 MobiDBLite consensus disorder prediction 20 39 - -
Aip05g03921 285 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 5 270 - -
Aip05g03921 285 SMART WRKY_cls 195 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip05g03921 285 MobiDBLite consensus disorder prediction 149 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03921 Aip-Chr5 147376646 147380070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03921 174 272 WRKY Transcription Factor Family AT5G52830 80.808 1.04e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip05g03921 WRKY 1.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03921 K13425 - aprc:113866622 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03118 03 99086725 99088037 Aip05g03921 05 147376646 147380070 ECH
Aip05g03921 05 147376646 147380070 Aip05g03921 05 147376646 147380070 ECH