Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03911 ATGAGGCCTGTAGCTCAGAGGATTAGAGCACGTGGTTACGAACCACGGTGTCGGCCCTCCTCGCCCACAACTGGCCTTAATCTCATCATATATATACTGGAGAATTGGACTGAACCCGAACACGACAAGTTCCTCGAAGCTCTTCAACTGTTTGATCGTGACTGGAAAAAGATTGGAGCATTTGTTGGATCAAAGACAGTTATACAGATTCGTAGTCATGCACAGAAATACTTCATAAAAGTTCAGAAGAGTGGGACAAGTGAGCATCTTCCTCCACCCAGGCCGAAAAGAAAAGCTGCGCATCCTTATCCTCAAAAGGCTTCCAAAAATGCTCCTTTACTCTCACAGCTATCAGAATCTTTTCAATCTTCATCTGCTTTACTTGAGTCCGGATATGTCCTGAAACATGACCCCTCCACAATGCTTAAAACTCCTATTATGAACACTGTGGTGCCTTCATGGTCAAACTCCACCTTGCAAACCACTAATTTACTGCATGTACCAAAAGTGAACGACCCTTCTGGTAGCAGTGAGAGTACCCCCAGAGTGCAGCCAGGTGATGAATCCAATGGACAGGGGAATAGTAGCTTTCCACTAAGAGTGCTTCCCGATTTCACTCAAGTATACAGCTTCATTGGCAGTGTATTTGATCCAAATACAACTGATCATTTGCACAAACTGAAAAACATGGACCGTATAGATGTTGAGACGGTCCTGTTGTTGATGAGAAATCTCTCTGTCAATTTAACTAGCCCAGATTTTGAGGACCATAGGAAGGTTCTTTCAACATACGAGGTTGAACTTGATACAGATGACTACATCAATGCAGATATACTTCAGGATGATCAGTTGAAGAGTGCTGCTACCTAG 870 0.4356 MRPVAQRIRARGYEPRCRPSSPTTGLNLIIYILENWTEPEHDKFLEALQLFDRDWKKIGAFVGSKTVIQIRSHAQKYFIKVQKSGTSEHLPPPRPKRKAAHPYPQKASKNAPLLSQLSESFQSSSALLESGYVLKHDPSTMLKTPIMNTVVPSWSNSTLQTTNLLHVPKVNDPSGSSESTPRVQPGDESNGQGNSSFPLRVLPDFTQVYSFIGSVFDPNTTDHLHKLKNMDRIDVETVLLLMRNLSVNLTSPDFEDHRKVLSTYEVELDTDDYINADILQDDQLKSAAT 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03911 289 ProSiteProfiles SANT domain profile. 34 82 IPR017884 -
Aip05g03911 289 Gene3D - 35 83 - -
Aip05g03911 289 MobiDBLite consensus disorder prediction 167 197 - -
Aip05g03911 289 CDD SANT 35 78 IPR001005 -
Aip05g03911 289 PANTHER PROTEIN REVEILLE 6 34 277 - -
Aip05g03911 289 MobiDBLite consensus disorder prediction 83 108 - -
Aip05g03911 289 Pfam Myb-like DNA-binding domain 35 78 IPR001005 -
Aip05g03911 289 SUPERFAMILY Homeodomain-like 35 83 IPR009057 -
Aip05g03911 289 PANTHER SWI/SNF COMPLEX-RELATED 34 277 - -
Aip05g03911 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 82 IPR017930 -
Aip05g03911 289 SMART sant 32 80 IPR001005 -
Aip05g03911 289 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 35 80 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03911 Aip-Chr5 147284593 147290204 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip05g03911 Myb_DNA-binding 3.6e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03911 - - gmx:100783949 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03911 05 147284593 147290204 Aip09g04041 09 146709444 146713527 ECH
Aip05g03911 05 147284593 147290204 Aip05g03911 05 147284593 147290204 ECH
Aip05g03911 05 147284593 147290204 Aip09g04041 09 146709444 146713527 PCT