Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03907 ATGGGAGCCAGATCGCTGAAGAAGAGGAGGCACGGTGAACATCTCGCAGCGCCACAAGCTTCTTCCATGGCGGCTGCTGCTGCTAATTCTCCACCGCGCCGCAATAAGGCTCGTCGCCCTTACGCCACCGTCTCCGTGCTTCTCTCGGGGGTTCTCTTTGTTTCCGTCGCGGCTCTCTTGTTCATTTCGTCGAACAAGTGGCGCGCATTCGGAAATTATGTTTCCTATGAGATGGTCAACGTGGTCAACGAGTTCCCTCACGACCCAGAAGCCTTCACCCAGGGCCTTCTTTATGCTGGAAATGACACCTTATTTGAATCTACTGGTCTATATGGCAGGGTATCTATTGTAATTTGTAAACATCTATATTTTTACTGCATGAAGGTGGAGGAGCTTCAGAGGATGGGTGATTCTTTATTTGGAGAAGGTTTAACTCTACTTGATAAAAGGCTGTTCCAAGTAACTTGGCTGCAGAAAGTTGGTTTCATATATGACCAGAAAACTTTGGGCGAATTAGGGACATTCAATCATGAGATGAAAGATGGTTGGGGTCTGGCGACTGATGGAAAAGTCCTCTTTGGAAGTGATGGCAGTTCAACATTGTATCAACTTGACCCTCGAACATTTAAAGCTTTATCAAAGCATACTATCTACTATAAGGATCAGCAAGTGTATAATCTCAATGAATTGGAATATATAGATGGTGAAGTTTGGGCGAATGTTTTTACAACCGACTGTATTGTAAGAATCTCTCCGAATGATGGCCGTGTTCTTGGATGGATTCTCCTCCCAAATTTAAGGCATGGCTTATTTTTTCTTGCTATTGATGTTTTGAATGGGATAGCATGGGATCGTCAGCAGAAAAGAATTTTTGTGACTGGAAAATTGTGGCCAAAGCTGTATGAAATCAAGAATCTCTCATCATTGCTATCAACACCAATATTCTTTGGAATACCATTATGGGTTTTGCTTGTATCTTCCATTGCAGCATTCATTCTTACAGTATGTATAATCATATGCATCTGCTGCATACACTATCATCCTCGTCGTCGAGAATCCTACCAAGCACGTTTCTCTTTATCCAAATCAGATGTCTGCAGGCGCCTCAGTAGTGTTCTTCATAGATCTTCATCCCTTGACAAATATAGATCATTGTTGCTTTCATCAGCATCATGCAACTTTTCAGAACTTGAGAAGAACTCTGAGTATTTATCAACTGAAGATGATCTTGATGGTCATGATGGTGCTGAGTTACTCCAATCTGACTCACCAGAGTTCAAAGGAGTTATGTGTCAGCACTTTCAGGTAGAGGAGTTAGAGGATGCTACAAATGGATTTGCTGAAAGAAATGTGATTGAAAGTGGGGACAATGGAACAGTTTATAGAGGTCTGTTAGCTACTAATATGAAGGTGGTTGTGAAGAAGCTACCTTGTCACAGTTGCCAACCTGAGGAGTCTTTTGCTTCACAAGTGGAGTTAACTGCACGTGCCAAGCACAAGAGGCTTGTGAAATTGATAGGATACTCTACTAATAGAACTTGCAGGCTGTTAGTATCTGAATATATAGATAATGGAAATCTGCATAAATGGCTTCATGAATTTCAAGGATCACTGAGCCCTCTAACATGGTCTATCAGATTGCACATTCTACAAGCTGTTGCAAATGGAATTGCATACCTTCATGAGGAAGTTGAACCAAAGATTATCCATGGCAGCATAAAATCTAAGAATATATTACTTGACCAACAATGGAATCCTAAGATCTCTGATTTTGGCCTTTTTAAGCTTCAAAGTTCTAACTCTAGTCACTCTATGAGTAACTTCACTGAGAGTAATGACATTTATGATTTCGGAATACTTATAATGGAGATTATATCAGGAAGGATTCCATTTCCATCACATCACAGTCAACCACAGGCCTATATAGTGGACTGGTTCAAGTCAATGATTTCCAATGGCAAGATTTCGGACTTGGTTGATCCGAAATTGCCCAAAAAGCCTTCTTCCATAGTTCTAAAGCGAATTATTTTGCTTGCTCTATGGTGTGTAGATCTTGATATGAATCCAAAACTCAAAATGGAAGATGTTGTTCAAATGCTTGAGTCCAACCAACTTCTTTTCTATAAGGAACACCACATTGCCATGGATTCTTTTGAGCAAAATTTCACTCCATAA 2175 0.4069 MGARSLKKRRHGEHLAAPQASSMAAAAANSPPRRNKARRPYATVSVLLSGVLFVSVAALLFISSNKWRAFGNYVSYEMVNVVNEFPHDPEAFTQGLLYAGNDTLFESTGLYGRVSIVICKHLYFYCMKVEELQRMGDSLFGEGLTLLDKRLFQVTWLQKVGFIYDQKTLGELGTFNHEMKDGWGLATDGKVLFGSDGSSTLYQLDPRTFKALSKHTIYYKDQQVYNLNELEYIDGEVWANVFTTDCIVRISPNDGRVLGWILLPNLRHGLFFLAIDVLNGIAWDRQQKRIFVTGKLWPKLYEIKNLSSLLSTPIFFGIPLWVLLVSSIAAFILTVCIIICICCIHYHPRRRESYQARFSLSKSDVCRRLSSVLHRSSSLDKYRSLLLSSASCNFSELEKNSEYLSTEDDLDGHDGAELLQSDSPEFKGVMCQHFQVEELEDATNGFAERNVIESGDNGTVYRGLLATNMKVVVKKLPCHSCQPEESFASQVELTARAKHKRLVKLIGYSTNRTCRLLVSEYIDNGNLHKWLHEFQGSLSPLTWSIRLHILQAVANGIAYLHEEVEPKIIHGSIKSKNILLDQQWNPKISDFGLFKLQSSNSSHSMSNFTESNDIYDFGILIMEIISGRIPFPSHHSQPQAYIVDWFKSMISNGKISDLVDPKLPKKPSSIVLKRIILLALWCVDLDMNPKLKMEDVVQMLESNQLLFYKEHHIAMDSFEQNFTP 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03907 724 SUPERFAMILY Protein kinase-like (PK-like) 427 701 IPR011009 -
Aip05g03907 724 Gene3D Transferase(Phosphotransferase) domain 1 522 716 - -
Aip05g03907 724 Pfam Protein tyrosine and serine/threonine kinase 450 637 IPR001245 GO:0004672|GO:0006468
Aip05g03907 724 MobiDBLite consensus disorder prediction 1 36 - -
Aip05g03907 724 ProSiteProfiles Protein kinase domain profile. 446 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03907 724 PANTHER BNAC04G54280D PROTEIN 311 715 - -
Aip05g03907 724 SUPERFAMILY YWTD domain 140 303 - -
Aip05g03907 724 PANTHER OS01G0323000 PROTEIN 311 715 - -
Aip05g03907 724 Gene3D Phosphorylase Kinase; domain 1 417 521 - -
Aip05g03907 724 Pfam Glutamine cyclotransferase 69 304 IPR007788 GO:0016603|GO:0017186
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03907 Aip-Chr5 147256750 147262800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03907 432 700 Receptor kinase-like Gene Family AT3G58690 34.021 5.73e-50 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aip05g03907 PK_Tyr_Ser-Thr 3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03907 K22757 - adu:107490846 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03907 05 147256750 147262800 Aip05g03907 05 147256750 147262800 ECH