Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03900 ATGATCTTCATGGCTGCTTCTTCTTCCATGATTTTCATTGGTGATGATGGTACCAACCAAGGCTCAAACTTTCTCTCTTCTGGCAAATCCTTTCCTCTCAGAAACCAAAACCCAAATCCAAAGTTGCCATCTTTGTATCACACTGCAAGAGTTTTCACCAACAATGGTGGCTACAGGTTCAGCATGAGGAAAAACGGCACTCACTTGGTTCGTTTTCATTTCTCACCTTTTAAGGCACAAGGTCATGATCTTAAATCTGCAAACTTTAGTGTCTTGGTTGATGGGAATTTGGTTCTCAGTAGGTTCAATTTCAAGCCAAATAATGATGATGCAATGATTAAAGAGTTCATTTTGAAATCAGAGTCTGATTTTCTTGAAATTATGTTTAGGCCTTTGAGGAATTCTGGTTTTGGATTTGTCAATGCTGTGGAAGTTTTTTCTGCCCCTGATGATTTTCTTTTAGATTTTGGAGCTAGGTTTGTTAGTGCCTCTGGTGTTGAGGAGTACAAGAACTTCTCAAATCAGGTTTTTGAAACTGTTCATAGGATCAATGTTGGGGGTTTGAAATTAACCCCTTTTAATGATACCCTTTGGAGGACTTGGATCCCTGATGAGGATTTTCTTGTCTTAAAGGAAGCAGCTAAGGCTGCAGTTACCACTCACACCCCCAATTATCAGAAGGGAGGTGCAACCCGAGAGATTGCGCCGGATAATGTTTATATGACTGCTCAGGAGATGAATATGAATCAGTCCACCTTAGCTTCACAGTTCAACATAACATGGAATTTTCCGGTGGCTTCCGGTGGCGTTCGACACTTGATTCGGTTGCATTTCTGTGATATTGTTAGTCCTGCTCTTAATTTGCTTTACTTTGATGTGTATATCAACAACTACTCTGCATATAAGGATGTTGATCTGTCATCCCTTACATTCCACGCACTTGCATCTCCAGTCTATGTGGATTTCATTGCAGATTCTGATGATTCGGGTGTTATTCAGATAAGTGTTGGCCCTTCTGATCTTAGCAGTTCAATGAGGAAGAATGCCATACTGAATGGAGCAGAGATATTGAAGATGGTTAATGTCATGGATTCGCATGTTTCGCCGAGGAAGAAGAGGATTTGGGTTTTGGTAGGCTCAATTGTTGGAGGGACTATTGTTTTGGTTCTAGTTGTAGCTGCTATTTTGCTTATTGTCAAATGCAAGAGGAAGAAACCAAGAGAAAGATCAGTAGAAAGTGTAGTGTGGACGCCGTTGCGCATGTTTGGAGGGAGTTCACAAAGTAGAATGTCTGAAGCTGTAGCTTTTCCATCTCCTGGTTCTTATGGTTATCTTGGTTTGAAGATCCCTTTTGCTGAGATTCAATTAGCAACAAACAATTTTGATAGAACTTTGATTATAGGGTCTGGAGGTTTTGGCATGGTTTATAAAGGAGTTCTCAGGGACAAGTTAAAGGTTGCTGTCAAGAGAGGGATGCCAGGATCAAGGCAGGGCCTTCCGGAATTCCAGACTGAAATAACTATTTTGTCCAAGATTCGCCATCGCCATCTTGTTTCGCTGGTTGGATACTGTGAAGAACATTCAGAAATGATTCTTGTTTATGAGTATGTGGAGAAAGGACCACTTAAGAAGCATTTGTATGGCTCTTCAGCACATCCACCTTTGTCCTGGAAGCAGCGACTCGAGATATGCATTGGCGCGGCTAGAGGTCTGCATTATCTTCACACTGGTTTCGCGCAAGGAATCATTCACCGGGACATCAAATCAACCAATATCTTGCTTGATGAGAATTATGTGGCCAAGGTTGCTGATTTTGGTCTATCAAGATCAGGGCCATGTATCAATGAAACTCATGTGAGTACTAATGTCAAGGGTAGTTTTGGTTATCTTGATCCAGAGTATTTCCGGAGGCAGCAACTCACGGATAAGTCAGATGTGTACTCATTCGGCGTTGTGCTTTTCGAGGTGCTGTGTGCTAGACCTGCTGTTGATCCACAACTTGACAGGGAACAGGTGAATTTAGCAGAATGGGCACTTGAATGTCAGAAGAAGGGAATGCTTGAACAAATCATTGATCCGCGTCTTGTTGGACAAATCAAGGAGAGTTCATTGAAGAAATTCGGGGAAACAGCAGAGAAATGTTTGGCTGAGTATGGTGTTGATAGGCCAAGCATGGGTGATGTGTTGTGGAATTTGGAGTACTTGCTTCAGCTCCAAGAAAATGGACAACAAGGTGAACCGGATAACGCGACTGCGACGATTGTTCCCGGGAATGCTTCTAGCAGCACAAGAACTGAAGATGATTCTGATAAAGGCTATTCTGACATAAGTTCTAGCCAGGTTTTTTCTCAACTAATGACCAATGAAGGCAGATAG 2376 0.4209 MIFMAASSSMIFIGDDGTNQGSNFLSSGKSFPLRNQNPNPKLPSLYHTARVFTNNGGYRFSMRKNGTHLVRFHFSPFKAQGHDLKSANFSVLVDGNLVLSRFNFKPNNDDAMIKEFILKSESDFLEIMFRPLRNSGFGFVNAVEVFSAPDDFLLDFGARFVSASGVEEYKNFSNQVFETVHRINVGGLKLTPFNDTLWRTWIPDEDFLVLKEAAKAAVTTHTPNYQKGGATREIAPDNVYMTAQEMNMNQSTLASQFNITWNFPVASGGVRHLIRLHFCDIVSPALNLLYFDVYINNYSAYKDVDLSSLTFHALASPVYVDFIADSDDSGVIQISVGPSDLSSSMRKNAILNGAEILKMVNVMDSHVSPRKKRIWVLVGSIVGGTIVLVLVVAAILLIVKCKRKKPRERSVESVVWTPLRMFGGSSQSRMSEAVAFPSPGSYGYLGLKIPFAEIQLATNNFDRTLIIGSGGFGMVYKGVLRDKLKVAVKRGMPGSRQGLPEFQTEITILSKIRHRHLVSLVGYCEEHSEMILVYEYVEKGPLKKHLYGSSAHPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCINETHVSTNVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLDREQVNLAEWALECQKKGMLEQIIDPRLVGQIKESSLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYLLQLQENGQQGEPDNATATIVPGNASSSTRTEDDSDKGYSDISSSQVFSQLMTNEGR 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03900 791 Gene3D - 4 149 - -
Aip05g03900 791 Gene3D - 176 360 - -
Aip05g03900 791 SMART serkin_6 461 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03900 791 ProSitePatterns Protein kinases ATP-binding region signature. 467 489 IPR017441 GO:0005524
Aip05g03900 791 MobiDBLite consensus disorder prediction 774 791 - -
Aip05g03900 791 CDD STKc_IRAK 467 733 - -
Aip05g03900 791 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 11 756 - -
Aip05g03900 791 Pfam Malectin-like domain 22 358 IPR024788 -
Aip05g03900 791 Gene3D Phosphorylase Kinase; domain 1 428 536 - -
Aip05g03900 791 MobiDBLite consensus disorder prediction 742 791 - -
Aip05g03900 791 PANTHER OS07G0166700 PROTEIN 11 756 IPR045272 GO:0004714|GO:0006468
Aip05g03900 791 Pfam Protein tyrosine and serine/threonine kinase 466 727 IPR001245 GO:0004672|GO:0006468
Aip05g03900 791 Gene3D Transferase(Phosphotransferase) domain 1 537 757 - -
Aip05g03900 791 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Aip05g03900 791 SUPERFAMILY Protein kinase-like (PK-like) 446 730 IPR011009 -
Aip05g03900 791 ProSiteProfiles Protein kinase domain profile. 461 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03900 791 MobiDBLite consensus disorder prediction 742 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03900 Aip-Chr5 147198089 147200654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03900 45 791 Receptor kinase-like Gene Family AT3G46290 50.000 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip05g03900 Malectin_like 9.7e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03900 - - gmx:100814974 1212.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03900 05 147198089 147200654 Aip05g03900 05 147198089 147200654 ECH