Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03883 ATGGAAACAAGCACCAAAGAAGACTTAGAAATCAAGAAAGTGGATTGTGATGCATCGGAGATCGAGTATGTTAGTTATGGTGGCGAGCACCACCTCCCCCTTATCATGAACCTAGTCGACCAAGAACTCAGCGAGCCTTACTCTATATTCACGTATCGTTACTTTGTCTATCTCTGGCCTCAGCTCTCTTTCTTGGCATTCCACAAGGGTAAATGTGTCGGCACGGTGGTTTGTAAGATGGGCGACCATCGAAACGTTTCCAGAGGATACATTGCCATGTTGGTTGTGATAAAGCCCTATAGAGGAAAAGGCATTGCTACAGAACTTGTTACTAGGTCTATTAAGGTGATGATGGAATCTGGTTGTGAAGAAGTTACTCTGGAATCAGAAGTTACAAACAAAGGAGCATTGGCACTCTATGGTCGCCTTGGCTTTATTAGGGCTAAGAGGCTCTTTCATTATTATTTGAACGGAGTGGATGCTTTCCGGCTCAAACTGCGATTCCCTCGGCCGGAGCTGCACCCATCTCTGCCTGTGATGGCAGATAAATATGGTAGTAGTCATGTACCAAGTGATCATGATAATTCAGCATTTGAACAATGA 603 0.4444 METSTKEDLEIKKVDCDASEIEYVSYGGEHHLPLIMNLVDQELSEPYSIFTYRYFVYLWPQLSFLAFHKGKCVGTVVCKMGDHRNVSRGYIAMLVVIKPYRGKGIATELVTRSIKVMMESGCEEVTLESEVTNKGALALYGRLGFIRAKRLFHYYLNGVDAFRLKLRFPRPELHPSLPVMADKYGSSHVPSDHDNSAFEQ 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03883 200 Pfam Acetyltransferase (GNAT) family 56 145 IPR000182 GO:0016407
Aip05g03883 200 Gene3D - 28 180 - -
Aip05g03883 200 PANTHER N-ALPHA-ACETYLTRANSFERASE 30 8 168 IPR044542 GO:0004596|GO:0017196
Aip05g03883 200 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 19 169 IPR000182 GO:0016407
Aip05g03883 200 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 29 170 IPR016181 -
Aip05g03883 200 CDD NAT_SF 63 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03883 Aip-Chr5 147008380 147008982 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aip05g03883 Acetyltransf_1 1.9e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03883 K00670 - gmx:100806790 343.199