Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03881 ATGGCAGCAGAGTCTCTGAATCTGAAGATCACAGGTAAGAGCCATGTGAAGGCAAAGAAGAACATTGGAAGAAAAGAGTATCAACTTGTGACCTTTGATCTTCCATACTTAGCATTTTACTACAACCAGAAGCTGCTGTTTTATAAAGGGAATGACTTTGAAGGAATGGTGGAGAAGGTGAAAGAGGGTCTAAGTGTGGTTCTTGAGGAGTTTCATCAGCTAGCAGGGAAGATAGGAAAAGATGAAGAAGGAGTTTTCAGAGTGGAATATGATGATGAAATGGAAGGTGTTGAAGTAACTGAGGCTGTTGCTGAGGATGTTGGTGTTGAAGATCTTGCTGTTTCTGAGAGTAGCAGTTCCTTGATGGAACTTGTTCCTTACAATGGTATCTTGAATTTAGAAGGCATGCATAGGCCTTTGCTTGCAATTCAGCTGACCAAACTGAAAGATGGGCTTGCAATGGGCTGTGCCTTCAACCATGCAGTCCTTGATGGGACTTCCACGTGGCAATTCATGAGTTCATGGGCCGAGATCTGCAGCGGCGCACCATCAACAGTAGCCCCACCCTTCCTTGACCGGACCAAGGCCCGAAACACCCGCGTGAAGCTTGACCTCTCATTGCCGGAGCCCAATGGGCTTCCATCCGAGAATGAGGAAAAGCCCAAGCCCAAATTAAGAGAAAAGATCTTCAAATTTTCCGAGTCTGCCATCGACAAGATCAAGTCAACGGTCAACGAAAACCCACCATCGGACGGCTCAAAGGCATTCTCAACATTCCAAGCTCTCTCGGCCCATGTTTGGCGCCACATAACCCTGGCCCGTAACCTAAAGCCCGAAGACTACACAGTCTTTACCGTATTCGTAGATTGTAGAAAACGGATCGACCCACCAATGCCAGAGGCCTATTTTGGAAACCTTATCCAAGCCATATTCACGGTGACAGCAGGTGGGCTTCTGTTGGCCCATCCACCACAATTCGGTGCATCATTGATCCAAAAAGCAATTGAAGCCCACAATGCTAAAGCAATTGATGAAAGAAACAAAGAGTGGGAGAGTGCACCAAAGATTTTTGAATTCAAGGATGCTGGAGTGAATTGTGTGGCTGTGGGAAGCTCTCCTAGGTTTAAAGTTTATGACATTGATTTTGGATGGGGGAAGCCTGAAAATGTGAGAAGTGGAACCAATAACAAATTTGATGGTATGATTTATTTGTATCCCGGCAAGAGTGGTGGTAGGAGCATTGATGTTGAGTTGACTTTGGACCCTCATGCTATGGAGATTTTGGAGAAAGACAAAGACTTCCTTCTTGAGGTTTAA 1317 0.4548 MAAESLNLKITGKSHVKAKKNIGRKEYQLVTFDLPYLAFYYNQKLLFYKGNDFEGMVEKVKEGLSVVLEEFHQLAGKIGKDEEGVFRVEYDDEMEGVEVTEAVAEDVGVEDLAVSESSSSLMELVPYNGILNLEGMHRPLLAIQLTKLKDGLAMGCAFNHAVLDGTSTWQFMSSWAEICSGAPSTVAPPFLDRTKARNTRVKLDLSLPEPNGLPSENEEKPKPKLREKIFKFSESAIDKIKSTVNENPPSDGSKAFSTFQALSAHVWRHITLARNLKPEDYTVFTVFVDCRKRIDPPMPEAYFGNLIQAIFTVTAGGLLLAHPPQFGASLIQKAIEAHNAKAIDERNKEWESAPKIFEFKDAGVNCVAVGSSPRFKVYDIDFGWGKPENVRSGTNNKFDGMIYLYPGKSGGRSIDVELTLDPHAMEILEKDKDFLLEV 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03881 438 Gene3D - 210 431 IPR023213 -
Aip05g03881 438 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 14 434 - -
Aip05g03881 438 Gene3D - 5 205 IPR023213 -
Aip05g03881 438 PANTHER BAHD ACYLTRANSFERASE DCR-RELATED 14 434 - -
Aip05g03881 438 Pfam Transferase family 8 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03881 Aip-Chr5 146993516 146997707 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03881 40 438 Monolignol Biosynthesis Gene Families AT5G48930 26.950 9.04e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03881 K19747 - gmx:100790669 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03881 05 146993516 146997707 Aip05g03881 05 146993516 146997707 ECH