Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03877 ATGCCTTCATGGTGGAAGTCATCAAAAGAGACCAAGAAGAAAACAGGTAAGGAAAGTTTTATTGACTCATTACAACGAAAATTTAAATCCCCATCTGAAGGTAAACCAGGCTCTAGATCTGGAGGATCTCGTAAACATTGTGATGACTCCATCTCTGAAAAGGGGGGTCAGTCTCCTGTTGGATCAAGATCTCCTTCACCTTCAAAAGTCGGAAGATGCCAAAGTTTTGCTGAAAGGCCTCTTTCTCAGCCACTACCACTTCCTAGCTTGCATCCATCAAATGTTAGCCGGGCAGATTCTGAAATTAGCATATTATCAAAATCAAAAACAGAAAAGGGGTCCAAGCCATCATTGTTTCTGCCCCTACCAAAACCTGCATGCATGCGTCGTAGGCTGAACCTTGCAGATTTGGACGGAGATCTGGGGCCTGCTTCAGTCTCTAGTGAGAGCTCTGCTGATAGTGATGAACCAACAGACTCGCGAAATCGTAGTCCTCTAGCAACTGATTCTGAGACCGGGACTAGAACCGCTGCGGGCAGTCCTTCCAGCCTGATGCTCAAGGATCAATCTACTGTTTGCCAAGTAAATTCAAAAGAAACCAAAACACCAGCAAACATTCTTGGTAATCATATGACTTCTACTTCACCAAAACGGAGGCCATTAAGCAACCATGTTCCAAATCTGCAGATTCCTCCTCACGGTGCTTTCTGTAGTGCTCCCGACAGTTCCAGGTCGAGTCCATCTAGAAGTCCATTGAGAGCATTTGCCACCGAACAGGTGTTGAACTCTGCTTTTTGGGCTGGAAAGACATGTTCAGATGTCAATTTCCTTGGATCGGGACACTGCTCCAGTCCAGGTTCTGGTCATAATTCTGGCCATAATTCAATGGGAGGGGACATGTCAGGACAGTTATTTTGGCAACCAAGTAGGGGTAGCCCTGAGTATTCACCCGTACCAAGTCCTAGAATGACTAGTCCAGGTCCAAGCTCAAGAGTTCAGAGTGGAGCCGTCACACCTATTCATCCCAGGGCTGGGGGAACACCCACTGAATCACAGTCTGGATGGGCTGATGATGGAAAACAACAGAGTCATCGTTTGCCCCTTCCTCCTTTATCAGTTACCAATTCCTCTCCTTTCTCTCATTCAAATTCTACTGCAACATCTCCATCTCTGCCTAGAAGTCCTGGAAGAGCAGATAATCCAGTTAGCCCTGGCTCACGTTGGAAAAAGGGGAAGCTAATAGGCAGAGGCACCTTCGGACATGTCTATGTTGGCTTCAATAAGTATGTCCTTTGTGCCAATGTTATTAATTTCATCTTAAACCAAATCATATATTTTTTGTTCCATGATGCCAAGTCTAAAGAAAGTGCTAAGCAATTAATGCAGGAAATTAATCTATTAAGCCGTTTACGGCATCCGAATATTGTACAGTATTATGGTTCTGAAACAGTAAGTGACAAGCTTTACATATATCTGGAGTATGTATCAGGAGGCTCCATATATAAACTTCTTCAAGAGTATGGGCAATTCGGTGAACTAGCTATTCGAAGTTATACTCAACAAATTTTATCAGGGCTTGCTTATTTACATGCTACAAACACTGTCCACAGGGACATTAAAGGAGCAAATATATTGGTAGATCCCAACGGCCGGGTCAAGTTGGCAGACTTTGGCATGGCAAAGCATATAACAGGGCAATCGTGTCCATTATCGTTCAAGGGAAGCCCTTATTGGATGGCGCCTGAGGTTATAAAGAACTCTAAAGGTTACAACCTTGCTGTGGATATATGGAGTCTTGGATGCACCGTTTTGGAAATGGCTACAACTAAGCCTCCCTGGAGTCAATATGAAGGGGTTGCTGCTATGTTTAAGATTGGTAATAGCAAGGAACTTCCTACCATCCCTGATAATCTTTCGAGTGAAGGAAAGGATTTTGTCATCAAATGTCTTCAACGAAATCCTCACAATCGCCCTTCAGCCCGCGAATTATTGGGCCATCCTTTTGTAAAATGTGCTGCGCCTTTGGAAAGACCTATTCTCAGCCCTCCAGCTTCAGACCTTGATTCTGGGATTGCACAAGCAACAAAATCTCTGGGTATTTGTCAAGGAAGGAATCTCTCTCCCTTGGATTCAGATAGACTTTCTGTTAATTCTTCTCGGGTTTTGAAAAATATTTCTCAAACAAGTGACATCCATATTCCAAGAAATATATCTTGCCCTGTCTCTCCGATTGGAAGCCCACTTTTGAGGTCAAGGTCCCCACAGCCCATAAATGGAAGAATGTCTCCCTCTCCTATATCTAGCCCTCGGACTGCTTCTGGTGCATCGACCCCTCTTCATGGCGGTAGTGGTGCCCTTCCAGTTAGTAATCACTTAGTTTACTTTCAAGAGGGTCTTGGAAGCTTGCCCAAGTCCTCAAATGTTGACATTTTTCGAGGAATGCAAATGACATCACGCATTACATCTGAAGTGGTTCCCACTGAAAATGATGTTCAATCAGTCTTGGCGGCACGGGTTTGTCGGCAGCTGCTGGGGAATAATGGGAAGATGAATCCATCCTTTGATCTAAGTCCCAACTCCTCGATGATCGGCCGGCCGAATGGTTTATGA 2610 0.4452 MPSWWKSSKETKKKTGKESFIDSLQRKFKSPSEGKPGSRSGGSRKHCDDSISEKGGQSPVGSRSPSPSKVGRCQSFAERPLSQPLPLPSLHPSNVSRADSEISILSKSKTEKGSKPSLFLPLPKPACMRRRLNLADLDGDLGPASVSSESSADSDEPTDSRNRSPLATDSETGTRTAAGSPSSLMLKDQSTVCQVNSKETKTPANILGNHMTSTSPKRRPLSNHVPNLQIPPHGAFCSAPDSSRSSPSRSPLRAFATEQVLNSAFWAGKTCSDVNFLGSGHCSSPGSGHNSGHNSMGGDMSGQLFWQPSRGSPEYSPVPSPRMTSPGPSSRVQSGAVTPIHPRAGGTPTESQSGWADDGKQQSHRLPLPPLSVTNSSPFSHSNSTATSPSLPRSPGRADNPVSPGSRWKKGKLIGRGTFGHVYVGFNKYVLCANVINFILNQIIYFLFHDAKSKESAKQLMQEINLLSRLRHPNIVQYYGSETVSDKLYIYLEYVSGGSIYKLLQEYGQFGELAIRSYTQQILSGLAYLHATNTVHRDIKGANILVDPNGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSKGYNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDNLSSEGKDFVIKCLQRNPHNRPSARELLGHPFVKCAAPLERPILSPPASDLDSGIAQATKSLGICQGRNLSPLDSDRLSVNSSRVLKNISQTSDIHIPRNISCPVSPIGSPLLRSRSPQPINGRMSPSPISSPRTASGASTPLHGGSGALPVSNHLVYFQEGLGSLPKSSNVDIFRGMQMTSRITSEVVPTENDVQSVLAARVCRQLLGNNGKMNPSFDLSPNSSMIGRPNGL 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03877 869 MobiDBLite consensus disorder prediction 55 71 - -
Aip05g03877 869 SUPERFAMILY Protein kinase-like (PK-like) 406 757 IPR011009 -
Aip05g03877 869 MobiDBLite consensus disorder prediction 744 782 - -
Aip05g03877 869 SMART serkin_6 408 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03877 869 MobiDBLite consensus disorder prediction 283 407 - -
Aip05g03877 869 Gene3D Transferase(Phosphotransferase) domain 1 406 685 - -
Aip05g03877 869 MobiDBLite consensus disorder prediction 748 778 - -
Aip05g03877 869 MobiDBLite consensus disorder prediction 283 310 - -
Aip05g03877 869 MobiDBLite consensus disorder prediction 7 52 - -
Aip05g03877 869 Pfam Protein kinase domain 409 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03877 869 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 810 - -
Aip05g03877 869 MobiDBLite consensus disorder prediction 1 224 - -
Aip05g03877 869 ProSiteProfiles Protein kinase domain profile. 408 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03877 869 MobiDBLite consensus disorder prediction 367 394 - -
Aip05g03877 869 MobiDBLite consensus disorder prediction 345 359 - -
Aip05g03877 869 MobiDBLite consensus disorder prediction 163 222 - -
Aip05g03877 869 MobiDBLite consensus disorder prediction 88 113 - -
Aip05g03877 869 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03877 Aip-Chr5 146952303 146956149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03877 1 788 MAP Kinase Kinase Kinase AT1G63700 61.111 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip05g03877 Pkinase 1.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03877 K20717 - gmx:100819762 1314.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03877 05 146952303 146956149 Aip09g04033 09 146645871 146650712 ECH
Aip05g03877 05 146952303 146956149 Aip05g03877 05 146952303 146956149 ECH
Aip09g04033 09 146645871 146650712 Aip05g03877 05 146952303 146956149 PCT